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Updated: Apr 25, 2026

Structural Biology and Analytical Chemistry Approaches for Characterizing C-Glycoside Metabolic Enzymes in Human Gut Microbiota
Published on: May 23, 2025
Structure-activity relationship-guided design of carbazole-thiazole hybrids as α-glucosidase inhibitors: DFT
Nguyen Thi Mai Tho1, Nguyen Van Thoi1, Nguyen Ngoc Huyen Tran1
1Faculty of Chemical Engineering, Industrial University of Ho Chi Minh City, 12 Nguyen Van Bao, Hanh Thong Ward, Ho Chi Minh 70000, Vietnam.
Abstract:
A series of novel carbazole-thiazole hybrids (5a-5q) was synthesised to explore structure-activity relationships (SAR) toward α-glucosidase inhibition. Enzymatic evaluation identified compound 5k as the most potent inhibitor (IC₅₀ = 5.23 µM), exhibiting approximately 20-fold greater activity than acarbose (IC₅₀ = 117.12 µM). Kinetic analysis indicated that 5k decreased both Vmax and Km, with near-parallel Lineweaver-Burk plots, suggesting a mixed-type inhibition with a predominant uncompetitive component. SAR analysis showed that electronic effects of substituents significantly influence inhibitory potency. Molecular docking revealed that 5k favourably binds within the α-glucosidase active site, forming interactions with Gly383, Phe385, and Lys439. Molecular dynamics simulations supported complex stability (RMSD < 2 Å). In silico ADMET analysis (ADMETlab 2.0) suggested low BBB permeability and limited oral bioavailability, indicating potential for intestinal-targeted activity. DFT calculations (ΔEgap = 3.770 eV; dipole moment = 2.225 D) provided theoretical insight into electronic properties, although their biological relevance remains tentative. In vivo evaluation using a zebrafish model of postprandial hyperglycaemia demonstrated that 5k significantly reduced glucose levels (Cmax ↓36.4%, AUC0-180 ↓27.7%) at 75 mg.kg-1, outperforming acarbose. These results support 5k as a promising lead for further optimisation.
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