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GAP mimetic activity of pan-Ras TCI daraxonrasib synergizes with K-Ras Switch-II pocket inhibition
Patrick Pfaff1, Kevan M Shokat1
1Department of Cellular and Molecular Pharmacology and Howard Hughes Medical Institute, University of California, 600 16th St, Genentech Hall, Room N514, San Francisco, CA, 94143, USA.
Abstract:
Tricomplex inhibitors (TCIs) are a novel class of direct Ras inhibitors that target the GTP-bound Ras(on) state through recruitment of Cyclophilin A. Daraxonrasib (RMC-6236) is a pan-Ras TCI that was recently shown to restore GTPase activity of G12-mutant Ras proteins. Structural analysis of a pan-Ras TCI bound to K-Ras(GDP-AlF3) reveals a transition-state arrangement of Tyr32 and Gln61 that closely resembles endogenous GTPase-GAP complexes. This includes a closed Switch-I conformation engaging the cis-GTPase machinery in a manner analogous to non-arginine-finger GAPs such as RanGAP. These observations position pan-Ras TCIs as pharmacologic GAP mimetics. The GTPase-promoting activity of daraxonrasib suggests synergy with Switch-II pocket K-Ras inhibitors, including the approved GDP-state selective K-Ras G12C inhibitor adagrasib (MRTX-849), whose engagement of K-Ras(GTP) is kinetically constrained by slow endogenous hydrolysis of the mutant GTPase. We demonstrate that daraxonrasib sensitizes K-Ras(GTP) to adagrasib labeling in both recombinant protein and cellular contexts. In K-Ras G12C and G12D mutant cell lines, combinations of daraxonrasib with adagrasib or HRS-4642 (MRTX-1133 analog) yield more rapid K-Ras engagement, rapid p-ERK suppression, and significant Loewe synergy scores in viability assays. These findings establish GAP mimetics as rational and potent combination partners for Switch-II pocket inhibitors. The synergistic combination has potential to deepen and prolong pathway suppression while enabling dose reductions that may mitigate on-target toxicity and resistance.
Insights
Novel tricomplex inhibitors (TCIs) act as pharmacologic GTPase-activating protein (GAP) mimetics. Combining daraxonrasib (a pan-Ras TCI) with K-Ras inhibitors like adagrasib shows synergistic effects in cancer cells.
Area of Science:
- Oncology
- Molecular Biology
- Drug Discovery
Background:
- Tricomplex inhibitors (TCIs) are a new class of direct Ras inhibitors targeting the GTP-bound Ras(on) state by recruiting Cyclophilin A.
- Daraxonrasib (RMC-6236), a pan-Ras TCI, restores GTPase activity in G12-mutant Ras proteins.
- Structural analysis reveals pan-Ras TCIs mimic endogenous GTPase-activating protein (GAP) complexes, acting as pharmacologic GAP mimetics.
Purpose of the Study:
- To investigate the synergistic potential of daraxonrasib with Switch-II pocket K-Ras inhibitors.
- To evaluate the combination's efficacy in enhancing Ras pathway inhibition and cellular viability.
Main Methods:
- Structural analysis of pan-Ras TCI bound to K-Ras(GDP-AlF3).
- Assessing daraxonrasib's ability to sensitize K-Ras(GTP) to adagrasib labeling in vitro and in cells.
- Evaluating combination therapy effects on p-ERK suppression and cell viability in K-Ras G12C and G12D mutant cell lines.
Main Results:
- Pan-Ras TCIs function as pharmacologic GAP mimetics by stabilizing a transition-state arrangement.
- Daraxonrasib sensitizes K-Ras(GTP) to adagrasib labeling, indicating enhanced inhibitor engagement.
- Combinations of daraxonrasib with adagrasib or HRS-4642 demonstrated rapid p-ERK suppression and significant synergistic effects on cell viability.
Conclusions:
- Pharmacologic GAP mimetics are rational and potent combination partners for Switch-II pocket inhibitors.
- Synergistic combinations can deepen and prolong pathway suppression, potentially reducing toxicity and overcoming resistance.
- This strategy offers a promising approach for enhanced cancer therapy by targeting Ras-mutated cancers.
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