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Mitochondrial Respiration Quantification in Yeast Whole Cells
Published on: November 8, 2024
The yeast mitochondrial porin represses Snf1/AMP kinase signaling to attenuate viral replication
Sabrina Chau1, Serena Marek1, Aayushee Khanna2
1Department of Molecular Genetics, University of Toronto, Toronto, ON M5S 1A8, Canada.
Abstract:
Although fungi are broadly infected with mycoviruses, the antiviral mechanisms fungal cells use to oppose viral replication are not well understood. Here, we discover a new mitochondrially controlled signaling mechanism in the budding yeast Saccharomyces cerevisiae that limits replication of L-A, an RNA mycovirus that endemically infects this organism. We show that Por1, the mitochondrial voltage dependent anion channel, prevents hyper-replication of L-A in stationary phase cells that have exhausted media nutrients. By investigating known stationary phase regulators, we find that deletion of the AMP-activated kinase homolog SNF1 reverses hyper-replication of L-A observed in por1Δ cells. This epistatic relationship suggests that Por1 negatively regulates Snf1 in stationary phase cells and derepressed Snf1 promotes L-A hyper-replication. We confirm this model, first demonstrating that POR1 prevents the accumulation of activated Snf1 throughout stationary phase. By investigating Snf1 signaling targets, we show that this POR1-SNF1 regulatory mechanism acts in stationary phase cells to limit amino acid availability that sustain L-A replication. POR1-SNF1 signaling represents a novel physiological control mechanism to limit viral replication in a eukaryotic cell.
Insights
Fungal cells possess a novel antiviral defense mechanism. The mitochondrial Por1 protein limits RNA mycovirus replication by regulating Snf1 kinase activity, controlling nutrient availability.
Area of Science:
- Mycology
- Virology
- Cell Biology
- Biochemistry
Background:
- Fungi are frequently infected by mycoviruses, yet the cellular antiviral mechanisms remain poorly understood.
- Understanding how fungi combat viral infections is crucial for both basic science and potential biotechnological applications.
Purpose of the Study:
- To identify and characterize novel antiviral defense mechanisms in the yeast Saccharomyces cerevisiae.
- To elucidate the role of mitochondrial signaling in controlling RNA mycovirus replication.
Main Methods:
- Investigated the role of the mitochondrial voltage-dependent anion channel (Por1) in regulating L-A RNA mycovirus replication.
- Utilized genetic analysis, including gene deletion studies (por1Δ, snf1Δ), to explore regulatory pathways.
- Examined the activation state of AMP-activated kinase homolog Snf1 and its signaling targets.
Main Results:
- Discovered that Por1 prevents L-A mycovirus hyper-replication in stationary phase yeast.
- Identified an epistatic relationship between Por1 and Snf1, indicating Por1 negatively regulates Snf1 activity.
- Demonstrated that the Por1-Snf1 pathway limits amino acid availability, thereby restricting viral replication.
Conclusions:
- A novel mitochondrially controlled signaling pathway involving Por1 and Snf1 acts as a physiological control mechanism against viral replication in yeast.
- This mechanism limits viral propagation by modulating nutrient availability during stationary phase.
- The findings reveal a new layer of eukaryotic antiviral defense.
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