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Published on: March 21, 2025
Evaluation of large language models for PI-RADS score extraction from free-text prostate MRI reports: a comparative
Jing Wen1, Yifan Qian1, Xun Chen1
1Department of Medical Imaging, Jiangsu Medical College, Yancheng, China.
Objective:
This study aimed to evaluate the ability of GPT-4o and Gemini 2.5 Pro to extract and assign PI-RADS v2.1 score from free-text prostate MRI reports, and compare their performance with human readers of varied experience.
Methods:
Three radiologists with differing levels of experience (resident, fellow, expert) independently reviewed the reports and assigned PI-RADS v2.1 scores. The same reports were processed through prompts with the GPT-4o and Gemini 2.5 Pro. Inter-rater agreement was evaluated using Gwet's AC1 coefficient, and the diagnostic performance was assessed using sensitivity, specificity, and area under the receiver operating characteristic curve (AUC).
Results:
Inter-rater agreement between human experts was highest between the expert and fellow (Gwet's AC1 = 0.68, 95% CI 0.61-0.75), which was significantly higher than between two LLMs (Gwet's AC1 = 0.52, 95% CI 0.44-0.59, P = 0.004). The agreement between expert and GPT (Gwet's AC1 = 0.42, 95% CI 0.34-0.51) was lower than between expert and Gemini (Gwet's AC1 = 0.49, 95% CI 0.41-0.57, P = 0.17). The AUCs for resident, fellow, and expert readers were 0.81 (95% CI 0.76-0.87), 0.86 (95% CI 0.81-0.91), and 0.89 (95% CI 0.85-0.93), and for GPT and Gemini were 0.85 (95% CI 0.81-0.90) and 0.84 (95% CI 0.80-0.89), respectively.
Conclusion:
LLMs demonstrated promising performance in assigning PI-RADS scores from free-text prostate MRI reports, with accuracy and agreement approaching that of general radiologists; however, they are not yet ready to replace expert interpretation in high-stakes clinical settings. Nevertheless, these findings support its potential as a supplementary tool for report standardization and trainee education.

