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Updated: Apr 28, 2026

Imaging of Biological Tissues by Desorption Electrospray Ionization Mass Spectrometry
Published on: July 12, 2013
Comparison of Mass Spectrometry Imaging by Desorption Electrospray Ionization (DESI) and Desorption Electro-Flow
Yunshuo Tian1, Ruolun Wei2, Yifan Meng3
1College of Letter and Science, University of California, Santa Barbara, CA 93106, USA.
Background:
Among atmospheric-pressure mass spectrometry imaging (MSI) methods, desorption electrospray ionization (DESI) and desorption electro-flow focusing ionization (DEFFI) represent cost-effective, high-throughput approaches that utilize pneumatically assisted charged solvent droplets to directly desorb and ionize analytes from sample surfaces.
Methods And Results:
In this study, we systematically compare the performance of conventional DESI-MSI with previously reported DEFFI-MSI configurations on the Orbitrap mass spectrometer platform, focusing on evaluating the lateral spatial resolution, signal intensity, and imaging speed. By scanning a standard patterned sample which has sharp edges, DESI-MSI achieved a spatial resolution of 70 µm, while DEFFI-MSI achieved 15 µm (approximately 4.7-fold improvement). For the representative ion at m/z 782.5621, DEFFI-MSI demonstrated significantly higher signal intensity across solvent flow rates ranging from 0.5 to 1.5 µL min-1. The enhanced ion yield directly translates to improved Orbitrap-based MSI efficiency: in both negative- and positive-ion modes, DEFFI generates rich full-scan mass spectra within the maximum 10 ms ion injection time, whereas DESI produces weaker mass spectra under the same conditions.
Conclusions:
Taken together, these results quantify the key performance metrics between DESI-MSI and DEFFI-MSI, demonstrating that DEFFI is the preferred method on Orbitrap-based MSI, because it simultaneously enhances spatial resolution, signal intensity, and imaging speed.
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