Related Experiment Video
Updated: Apr 30, 2026

Cell Type-specific Gene Expression Profiling in the Mouse Liver
Published on: September 17, 2019
Liver-Specific Deletion of Cnot11 Delays Postnatal Hepatocyte Maturation and Transiently Impairs Liver Function in
Saori Nishijima1, Toru Suzuki2, Takaya Abe3
1Cell Signal Unit, Okinawa Institute of Science and Technology Graduate University, Onna, Okinawa, Japan.
Abstract:
The CCR4-NOT complex is a central regulator of post-transcriptional gene expression that controls mRNA deadenylation and decay. Although the catalytic subunits have been well characterized, the physiological roles of several non-catalytic subunits including CNOT11 in mammalian tissues remain incompletely understood. Here, we investigate the physiological role of CNOT11 using genetic mouse models. No homozygous global Cnot11 knockout mice are obtained from heterozygous intercrosses, indicating that CNOT11 is required for early development. We generate hepatocyte-specific Cnot11 knockout mice (Cnot11-LKO) and find that Cnot11-LKO mice exhibit growth retardation and alterations in serum biochemical parameters during early postnatal stages, which are largely resolved by adulthood. Histological analysis does not reveal overt liver injury, while morphological differences in hepatocytes are observed. A marked increase in Ki67-positive cells was observed in the liver of Cnot11-LKO mice relative to control mice. Most Ki67-positive cells express HNF4A, suggesting that hepatocyte maturation is still in progress in the absence of CNOT11. Transcriptomic analyses of early postnatal livers reveal increased expression of cell cycle-related genes and reduced expression of metabolic genes, further supporting delayed liver maturation. These findings suggest that CNOT11 contributes to proper postnatal liver maturation and is required for the timely establishment of metabolically mature hepatocyte functions.
Insights
CNOT11 is essential for early development and postnatal liver maturation in mice. Its absence delays hepatocyte maturation, impacting metabolic function establishment.
Area of Science:
- Molecular Biology
- Developmental Biology
- Genetics
Background:
- The CCR4-NOT complex regulates gene expression, controlling mRNA deadenylation and decay.
- The roles of non-catalytic subunits like CNOT11 in mammalian tissues are not fully understood.
Purpose of the Study:
- To investigate the physiological role of CNOT11 in mammalian development and liver function.
- To understand CNOT11's contribution to hepatocyte maturation.
Main Methods:
- Generation of global and hepatocyte-specific Cnot11 knockout mouse models.
- Analysis of developmental phenotypes, serum biochemistry, liver histology, and cell proliferation markers (Ki67).
- Transcriptomic analysis of early postnatal livers.
Main Results:
- Homozygous Cnot11 knockout is lethal early in development.
- Hepatocyte-specific Cnot11 knockout mice show postnatal growth retardation and altered serum parameters.
- Delayed hepatocyte maturation, indicated by increased proliferation (Ki67) and altered gene expression (cell cycle vs. metabolic genes).
Conclusions:
- CNOT11 is crucial for early development and timely postnatal liver maturation.
- CNOT11 deficiency leads to delayed establishment of mature hepatocyte metabolic functions.
- CNOT11 plays a significant role in regulating gene expression during liver development.

