Schlafen 11 (SLFN11) overexpression and nucleolar localization in response to bortezomib in multiple myeloma

Yasuhiro Arakawa1,2,3, Daiki Taniyama1, Kazuhito Suzuki2

  • 1Laboratory of Molecular Pharmacology and Developmental Therapeutics Branch, Center for Cancer Research, NCI, NIH.

Insights

Schlafen family member 11 (SLFN11) is highly expressed in multiple myeloma (MM) and influences treatment response. It confers resistance to bortezomib but sensitivity to other therapies, acting as a dual biomarker.

Area of Science:

  • Immunology
  • Molecular Biology
  • Oncology

Background:

  • Schlafen family proteins, including SLFN11, are interferon-inducible and involved in antiviral responses, immune signaling, and proteotoxic stress.
  • SLFN11 acts as a biomarker for chemotherapeutic response by inducing cell death in replicative damage and is epigenetically downregulated in many solid tumors.

Purpose of the Study:

  • To investigate the expression and significance of SLFN11 in multiple myeloma (MM).
  • To determine SLFN11's role in MM pathogenesis and its potential as a therapeutic biomarker.

Main Methods:

  • Analysis of TCGA and MMRF CoMMpass datasets for SLFN11 expression in MM subtypes.
  • Correlation analysis of SLFN11 expression with disease progression markers (MKI67/Ki-67) and transcriptional programs.
  • Experimental investigation of SLFN11's response to bortezomib, including nucleolar translocation and ribosomal RNA synthesis suppression.
  • Assessment of SLFN11 knockout cells' sensitivity to bortezomib and exatecan.

Main Results:

  • SLFN11 is highly expressed across most MM subtypes, with retained expression in plasma cells despite increased proliferation.
  • SLFN11 expression correlates with super-enhancer-driven plasma cell transcriptional programs.
  • Bortezomib treatment induces SLFN11 nucleolar accumulation and suppresses ribosomal RNA synthesis.
  • SLFN11 knockout enhances bortezomib sensitivity but confers exatecan resistance, indicating a dual role in stress response.

Conclusions:

  • SLFN11 plays a significant role in multiple myeloma, influencing cellular responses to proteasome inhibition and replication stress.
  • SLFN11's nucleolar translocation and suppression of rRNA synthesis upon bortezomib treatment contribute to treatment resistance.
  • SLFN11 functions as a dual biomarker, predicting resistance to bortezomib and sensitivity to topoisomerase I inhibitors, aiding precision therapy selection in MM.