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Updated: May 1, 2026

Author Spotlight: A Single-Entry Point Endoscopic Intraventricular Approach for Third Ventriculostomy and Pineal Biopsy
Published on: June 28, 2024
Genetic landscape and molecular targets in pediatric pineal tumors
Elena Pasquinelli1, Milena Guidi1, Iacopo Sardi1
1Neuro-Oncology Unit, Cancer Genetics Program, Meyer Children's Hospital IRCCS, Florence, Italy.
Abstract:
Pineal region tumors are rare and biologically heterogeneous central nervous system neoplasms that occur predominantly in the pediatric population and are associated with significant morbidity and mortality. Among these, pineal parenchymal tumors encompass a spectrum of entities ranging from indolent pineocytomas to highly aggressive pineoblastomas. Recent advances in genomic, epigenomic, and transcriptomic profiling have fundamentally reshaped the understanding of these tumors, moving beyond purely histological classification toward molecularly defined subgroups with distinct biological behavior and clinical outcomes. This review provides a comprehensive overview of the current molecular landscape of pineal region tumors, with a particular focus on genetic predisposition, somatic driver alterations, DNA methylation profiles, and transcriptional programs across pineocytoma, pineal parenchymal tumor of intermediate differentiation (PPTID), pineoblastoma, papillary tumor of the pineal region (PTPR), and desmoplastic myxoid tumor, SMARCB1-mutant. Key oncogenic mechanisms involving microRNA biogenesis disruption, cell-cycle deregulation, MYC/FOXR2-driven transcriptional amplification, PI3K/AKT/mTOR pathway activation, and chromatin remodeling defects are discussed, highlighting their prognostic and therapeutic relevance. In particular, the molecular subdivision of pineoblastoma into distinct subgroups has revealed subgroup-specific vulnerabilities that may be exploitable through targeted therapies. Emerging translational approaches, including molecularly guided treatment strategies and rapid intraoperative sequencing technologies, are also addressed. Despite these advances, the rarity of pineal region tumors continues to limit large-scale clinical trials. Multicenter collaboration and systematic integration of molecular profiling into clinical practice will be essential to improve outcomes for affected children.
Insights
Molecular profiling reshapes understanding of rare pineal region tumors, revealing distinct subgroups. This advances targeted therapies for pineoblastoma and improves pediatric cancer outcomes.
Area of Science:
- Neuro-oncology
- Genomics
- Epigenomics
Background:
- Pineal region tumors are rare, heterogeneous central nervous system neoplasms primarily affecting children.
- These tumors, including pineocytomas and pineoblastomas, have significant morbidity and mortality.
- Histological classification is evolving towards molecularly defined subgroups.
Purpose of the Study:
- To provide a comprehensive overview of the molecular landscape of pineal region tumors.
- To focus on genetic predisposition, somatic alterations, methylation, and transcriptional programs.
- To discuss the prognostic and therapeutic relevance of key oncogenic mechanisms.
Main Methods:
- Review of recent advances in genomic, epigenomic, and transcriptomic profiling.
- Analysis of molecular data across various pineal tumor types (pineocytoma, PPTID, pineoblastoma, PTPR, SMARCB1-mutant tumors).
- Discussion of oncogenic mechanisms and emerging translational approaches.
Main Results:
- Molecular profiling has redefined pineal region tumor classification into distinct subgroups.
- Key oncogenic pathways identified include microRNA disruption, cell-cycle deregulation, MYC/FOXR2 amplification, PI3K/AKT/mTOR activation, and chromatin remodeling defects.
- Molecular subdivision of pineoblastoma reveals subgroup-specific vulnerabilities for targeted therapies.
Conclusions:
- Advances in molecular profiling are crucial for understanding pineal region tumors.
- Targeted therapies informed by molecular subgrouping hold promise for improved treatment outcomes.
- Multicenter collaboration and integration of molecular profiling into clinical practice are essential.
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