Related Experiment Video
Updated: May 2, 2026

Leveraging CyVerse Resources for De Novo Comparative Transcriptomics of Underserved Non-model Organisms
Published on: May 9, 2017
De novo transcriptome assembly of Clitoria ternatea flowers
Nallammai Singaram1,2, Muhamad Afiq Bin Mohamed Akbar3, Hamidun Bunawan4
1School of Biosciences, Faculty of Health and Medical Sciences, Taylor's University, Jalan Taylor's, Subang Jaya, Selangor, Malaysia.
Objective:
The Clitoria ternate flowers are widely used for its anthocyanin pigmentation. However, the flowers' colour ranges from white to light blue to deep blue, purple or even pink. The butterfly pea flower colours are known to be influenced by variety and not environmental factors. Despite its interest there is a lack of understanding of the level of gene expression between varieties, in producing blue and white butterfly pea flowers. Hence, transcriptome assembly of genes expressed in different butterfly pea flowers and subsequent understanding of the key genes will help in increasing the pigments accordingly.
Data Description:
An RNA library was generated from RNA extracted from three different sources of flower petals as in white, light blue and dark blue butterfly pea flowers and sequenced using the Illumina HiSeq Platform. These data sets were then used to produce and assemble the first transcriptome assembly based on Clitoria ternate or commonly known as butterfly pea, paving way for anthocyanin related gene identification.
More Related Videos
13:03Robust DNA Isolation and High-throughput Sequencing Library Construction for Herbarium Specimens
Published on: March 8, 2018
12:10An Experimental and Bioinformatics Protocol for RNA-seq Analyses of Photoperiodic Diapause in the Asian Tiger Mosquito, Aedes albopictus
Published on: November 30, 2014
Related Concept Videos
RNA-seq
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
Genome Annotation and Assembly