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Updated: May 2, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
New genetic feature associated with fundus albipunctatus: case series of two Spanish children with LRAT gene mutation
Anna Baldaquí-Baeza1, Jesús Díaz-Cascajosa2,3, Delia Yubero-Siles4
1Ophthalmology department, Hospital del Mar, Barcelona, Spain. abaldaquibaeza@gmail.com.
Insights
Genetic variants in the LRAT gene were identified in two unrelated children with fundus albipunctatus (FAP). These LRAT gene mutations cause a FAP-like phenotype, expanding knowledge of retinal dystrophies.
Area of Science:
- Ophthalmology
- Genetics
- Molecular Biology
Background:
- Fundus albipunctatus (FAP) is a rare inherited retinal disorder.
- The genetic basis of FAP is not fully understood, with limited reported cases.
- Nyctalopia (night blindness) is a primary symptom, often without visual field constriction.
Purpose of the Study:
- To investigate the genetic mutations responsible for FAP in two Spanish pediatric patients.
- To elucidate the mechanism of action of identified genetic variants.
- To expand the understanding of LRAT gene involvement in retinal dystrophies.
Main Methods:
- Clinical follow-up of two pediatric patients with FAP-compatible diagnosis.
- Comprehensive ophthalmological examinations including visual acuity, visual field, fundus imaging, autofluorescence, OCT, and ERG.
- Next-generation sequencing (NGS) for genetic analysis of DNA samples.
Main Results:
- Compound heterozygous pathogenic variants in the LRAT gene were identified in both unrelated patients.
- The same two pathogenic LRAT variants were found in both individuals.
- No other genetic alterations were identified as causative.
Conclusions:
- LRAT gene variants can lead to a fundus albipunctatus (FAP)-like phenotype.
- This finding expands the known spectrum of LRAT-associated retinal disorders.
- LRAT variants are implicated in FAP, Leber congenital amaurosis (LCA), and Early Onset Severe Retinal Dystrophy (EOSRD).
Objective:
To describe the genetic mutation and its action mechanism in patients with compatible diagnosis of fundus albipunctatus (FAP).
Subjects And Methods:
We describe the clinical evolution and genetic findings of two female Spanish children of 14 and 16 years old who have been followed at the children's hospital Sant Joan de Déu (Barcelona, Spain). Nyctalopia without detectable field constriction was the initial symptom. Retinal fundus was compatible with FAP or retinitis punctata albescens (RPA). We have registered ophthalmological examination from each visit, including visual acuity, visual field assessment, wide-field fundoscopy imaging, fundus autofluorescence and optical coherence tomography. Full-field electroretinogram (ERG) was also performed. DNA sampling was analysed by next-generation sequency (NGS).
Results:
Compound heterozygous pathogenic variants in the LRAT gene were identified in both children. Interestingly, these were the same two pathogenic variants, despite the families being unrelated. No additional genetic alterations were found that could explain the disease in our patients.
Conclusions:
To the best of our knowledge, up to the present time, only a single clinical case involving a genetic variant in the LRAT gene leading to an FAP phenotype has been reported in the literature. LRAT genetic variants, despite their low frequency in clinical practice, seem to lead to a FAP-like phenotype, in addition to their established association with Leber congenital amaurosis (LCA) and Early Onset Severe Retinal Dystrophy (EOSRD).
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