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Beyond Ribosomal Mutations: Identification of MPN_080 as a Novel ATPase-Dependent Determinant of Macrolide Resistance
Shaoli Li1,2,3, Yuyan Xia3, Fei Zhao4
1Capital Institute of Pediatrics-Peking University Teaching Hospital, Beijing 100020, China.
Abstract:
Mycoplasma pneumoniae is a significant pathogen responsible for community-acquired respiratory infections in children and adolescents, with the rising prevalence of macrolide-resistant M. pneumoniae (MRMP), particularly in Asia, presenting critical treatment challenges. Our previous study inferred that a macrolide efflux pump may contribute to macrolide resistance in M. pneumoniae in addition to the common point mutations in 23S rRNA gene. This study aimed to define the specific pump and confirm its role. Through comparative genomic analysis, we identified a candidate gene, MPN_080, encoding an ABC transporter permease, which was further characterized using phylogenetic analysis, AlphaFold-based structural modeling, and biochemical assays. Overexpression of MPN_080 from an erythromycin-resistant isolate in the erythromycin-sensitive M129 resulted in a significant increase in minimum inhibitory concentrations (MICs) from <0.125 µg/mL to 1 µg/mL, while similar overexpression of MPN_080 derived from M129 did not affect MICs. Notably, this resistance mechanism operates independently of M. pneumoniae virulence factors, as evidenced by unaltered colonization capacity in NCI-H292 cells and consistent immune response patterns across both strains. Our findings establish MPN_080 as a novel determinant of macrolide resistance functioning associated with enhanced ATPase activity. These insights into non-classical resistance mechanisms may guide future diagnostic and therapeutic strategies against MRMP.
Insights
Macrolide resistance in Mycoplasma pneumoniae is a growing concern. This study identifies MPN_080, an ABC transporter, as a novel macrolide efflux pump contributing to this resistance.
Area of Science:
- Microbiology
- Molecular Biology
- Genomics
Background:
- Mycoplasma pneumoniae causes respiratory infections, with increasing macrolide resistance (MRMP) posing treatment challenges.
- Previous research suggested macrolide efflux pumps, besides rRNA mutations, contribute to MRMP.
- This study aimed to identify and confirm the role of a specific efflux pump in MRMP.
Purpose of the Study:
- To identify the specific macrolide efflux pump in Mycoplasma pneumoniae.
- To confirm the role of the identified pump in conferring macrolide resistance.
- To investigate the mechanism and impact of this resistance on virulence.
Main Methods:
- Comparative genomic analysis to identify candidate genes.
- Phylogenetic analysis, AlphaFold structural modeling, and biochemical assays for characterization.
- Gene overexpression studies in M129 strain to assess impact on Minimum Inhibitory Concentrations (MICs).
Main Results:
- The ABC transporter permease gene, MPN_080, was identified as a candidate.
- Overexpression of MPN_080 from a resistant isolate significantly increased erythromycin MICs.
- The MPN_080-mediated resistance mechanism was independent of M. pneumoniae virulence factors.
Conclusions:
- MPN_080 is a novel determinant of macrolide resistance in Mycoplasma pneumoniae.
- This resistance mechanism involves enhanced ATPase activity of the ABC transporter.
- Findings offer insights for developing new diagnostic and therapeutic strategies against MRMP.
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