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Multiplexed Fluorescent Microarray for Human Salivary Protein Analysis Using Polymer Microspheres and Fiber-optic Bundles
Published on: October 10, 2013
A Sensitive Multichannel Fluorescent Polymer Sensor Array for the Detection of Protein Fluctuations in Serum
Junwhee Yang1, Colby Alves1, Kanwal Nazir1
1Department of Chemistry, University of Massachusetts Amherst, 710 North Pleasant Street, Amherst, MA 01003, USA.
None:
Serum contains diverse proteins whose concentrations vary with pathological conditions such as cancer, liver disease, neurological disorder, and infections. Conventional methods like serum protein electrophoresis (SPEP) and enzyme-linked immunosorbent assay (ELISA) are gold standards for protein identification; however, they are time-consuming and can miss abnormal serum protein levels. Inspired by chemical nose sensing based on selective sensor-analyte interactions, we synthesized five pyrene-conjugated fluorescent polymers (PFPs) with distinct side-chain head groups to construct a multichannel fluorescence sensor array. These polymers were screened for sensitivity to changes in serum protein levels using linear discriminant analysis (LDA), a machine learning method. This process led to the successful discovery of two PFPs that effectively detect protein level fluctuations. These PFPs provided a sensitive sensor array capable of generating a high-content response pattern (fingerprint) with six fluorescence channels. This sensor array successfully discriminated protein level fluctuations in serum with 98% jackknife classification accuracy and 95% unknown identification accuracy. This polymer sensor array holds strong potential as a diagnostic tool for serum-based samples and can be extended to other applications related to protein identification.

