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Machine Learning-Assisted Plasma Metabolomics Identifies a Five-Metabolite Panel for Colorectal Cancer Detection.

Jun-Kai Wong1, Chung-Hsien Lin1, Hsin-Yi Wu2

  • 1Department of Medical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan 70101, Taiwan.

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Summary
This summary is machine-generated.

A new five-metabolite panel in plasma shows promise for early colorectal cancer (CRC) detection. This blood test accurately identifies CRC, potentially improving early diagnosis and risk stratification alongside current screening methods.

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Area of Science:

  • Biochemistry
  • Oncology
  • Analytical Chemistry

Background:

  • Colorectal cancer (CRC) is a major global health concern with high mortality rates.
  • Current screening methods for CRC require improvement, necessitating novel noninvasive diagnostic strategies.

Purpose of the Study:

  • To develop and validate a noninvasive plasma-based metabolomic signature for early colorectal cancer detection.
  • To identify specific plasma metabolites that can differentiate CRC patients from healthy individuals.

Main Methods:

  • An integrated plasma metabolomics workflow using untargeted and targeted liquid chromatography-mass spectrometry.
  • Machine learning (random forest) for feature prioritization and metabolite annotation.
  • Validation in independent patient and control cohorts, with diagnostic performance assessed by logistic regression.

Main Results:

  • Five consistently reduced plasma metabolites (N-methylcytisine, 2-piperidone, theophylline, dl-norleucine, linolenic acid) were identified.
  • The five-metabolite panel achieved high diagnostic performance (AUC 0.968, 97.9% sensitivity, 89.4% specificity) in the validation cohort.
  • In vitro assays indicated that the identified metabolites modulate CRC cell migration and invasion.

Conclusions:

  • The identified five-metabolite plasma signature reflects CRC-associated metabolic alterations.
  • This panel demonstrates strong discriminatory performance and may serve as a valuable adjunct to existing CRC screening modalities.
  • The findings support the potential of this metabolomic signature for CRC risk stratification and early detection.