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AutoNeuro: An Open-Source fMRI Toolbox for Real-Time Neuroadaptive Task Design
Oliver Sherwood1, David Haydock2, Raha Razin2
1Institute of Psychiatry, Psychology and Neuroscience, King's College London, UK.
Biorxiv : the Preprint Server for Biology
|May 4, 2026
Summary
AutoNeuro is an open-source framework for adaptive real-time fMRI experiments. It enables dynamic control of experimental parameters based on ongoing brain activity, optimizing data acquisition for brain mapping.
Area of Science:
- Neuroimaging
- Computational Neuroscience
- Biomedical Engineering
Background:
- Real-time functional magnetic resonance imaging (fMRI) allows adaptive study of brain function.
- Current real-time fMRI systems face limitations in infrastructure, flexibility, and closed-loop control, often focusing narrowly on neurofeedback.
Purpose of the Study:
- To introduce AutoNeuro, an open-source framework for real-time fMRI acquisition, analysis, and adaptive experimental control.
- To provide a flexible platform for closed-loop neuroimaging, moving beyond traditional neurofeedback designs.
Main Methods:
- AutoNeuro connects directly to MRI scanners for low-latency data streaming and processing.
- A modular pipeline performs real-time preprocessing and feature extraction.
- A Bayesian optimization agent adaptively selects task conditions within a defined 'experiment space' to maximize a user-defined objective function.
Main Results:
- The framework successfully operated within real-time processing constraints.
- Stable model estimates were maintained across iterations, demonstrating reliable performance.
- The system converged on experimental conditions that were most relevant to the measured brain metric, effectively mapping brain responses.
Conclusions:
- AutoNeuro offers a flexible and efficient platform for closed-loop neuroimaging.
- It supports both hypothesis-driven optimization and exploratory mapping of brain metrics.
- This framework advances the adaptive study of brain function using real-time fMRI.

