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Complex Karyotype in CLL-How to Count Cytogenetic Aberrations Consistently and Efficiently
Alessandro Baldi1, Anna Stengel1, Martha-Lena Müller1
1MLL Munich Leukemia Laboratory, Munich, Germany.
Genes, Chromosomes & Cancer
|May 5, 2026
Summary
Complex karyotype (CK) in chronic lymphocytic leukemia (CLL) impacts prognosis. A simpler counting method by Jondreville et al. is recommended, focusing on the most complex clone for accurate risk stratification.
Area of Science:
- Hematology
- Genetics
- Oncology
Background:
- Complex karyotype (CK) is a significant adverse prognostic marker in chronic lymphocytic leukemia (CLL).
- Discrepancies in counting chromosomal aberrations affect CK classification and patient risk stratification.
- Standardization of CK assessment is crucial for reliable prognostic evaluation in CLL.
Purpose of the Study:
- To systematically compare two distinct methods for counting chromosomal aberrations in CLL.
- To evaluate the impact of different counting strategies on CK classification and prognostic stratification.
- To recommend a standardized and unambiguous method for determining CK status in CLL.
Main Methods:
- Analysis of chromosome banding data from 1605 CLL patients.
- Comparison of the Jondreville et al. counting method with the International System for Human Cytogenomic Nomenclature (ISCN) method.
- Evaluation of aberration counting across all clones versus within the most complex clone.
Main Results:
- The Jondreville et al. and ISCN methods yielded different CK classifications in 7.5% of cases.
- Both methods demonstrated similar prognostic performance for ambiguous cases.
- Counting aberrations in the most complex clone improved stratification for 3.5% of differentially classified cases.
Conclusions:
- The Jondreville et al. method is recommended for CK determination in CLL due to its simplicity and clarity.
- Counting aberrations solely within the most complex clone provides superior risk stratification.
- Standardizing CK assessment using the proposed method will enhance prognostic accuracy in CLL management.

