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Updated: May 7, 2026

Highly Efficient Gene Disruption of Murine and Human Hematopoietic Progenitor Cells by CRISPR/Cas9
Published on: April 10, 2018
Efficient gene disruption with CRISPR-Cas3 in human T cells
Tomoaki Fujii1, Yukimi Sakoda2,3, Kazuto Yoshimi1,4
1Division of Animal Genetics, Laboratory Animal Research Center, Institute of Medical Science, The University of Tokyo, 4-6-1 Shirokanedai, Minato-ku, Tokyo 108-8639, Japan.
The CRISPR-Cas3 system offers a safer alternative to CRISPR-Cas9 for genome editing in T cells. This study demonstrates its potential for reducing immune rejection and enhancing CAR-T cell therapies without off-target effects.
Area of Science:
- Molecular Biology
- Gene Editing Technologies
- Immunotherapy
Background:
- CRISPR-Cas9 is a versatile genome editing tool but faces safety challenges like off-target mutations and chromosomal rearrangements.
- Clinical applications of CRISPR-Cas9 are limited by these safety concerns.
- CRISPR-Cas3, a Class 1 CRISPR system, shows promise as a safer alternative with reduced off-target activity.
Purpose of the Study:
- To evaluate the efficacy and safety of the CRISPR-Cas3 system for genome editing in human T cells.
- To assess the potential of CRISPR-Cas3 in developing advanced T cell-based therapies.
- To compare the off-target effects of CRISPR-Cas3 with CRISPR-Cas9.
Main Methods:
- Application of the CRISPR-Cas3 system to human T cells.
- Targeted disruption of T cell receptor alpha constant (TRAC) and beta-2 microglobulin (B2M) genes.
- Analysis of gene deletions, off-target mutations, and CAR-T cell functionality.
Main Results:
- Successful disruption of TRAC and B2M genes in human T cells using CRISPR-Cas3.
- Gene deletions reduced graft-versus-host disease risk and host immune rejection.
- No off-target mutations were detected in CRISPR-Cas3-edited cells, unlike CRISPR-Cas9.
- CRISPR-Cas3-edited CAR-T cells maintained tumor cell cytotoxicity and showed reduced alloreactivity.
Conclusions:
- CRISPR-Cas3 is a safer and effective genome editing platform for T cell engineering.
- This system holds significant potential for next-generation allogeneic T cell therapies.
- CRISPR-Cas3 offers a promising alternative to CRISPR-Cas9 for clinical applications in immunotherapy.
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