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Updated: May 8, 2026

Amplifying and Quantifying HIV-1 RNA in HIV Infected Individuals with Viral Loads Below the Limit of Detection by Standard Clinical Assays
Published on: September 26, 2011
Proviral HIV-1 DNA Below Detection in Early Treated Adolescents After Previous Treatment Interruption
Kavidha Reddy1,2, Louise Kuhn3, Shaun Barnabas4
1Africa Health Research Institute, Durban, South Africa.
Background:
Low and undetectable HIV-1 DNA levels are associated with greater likelihood of ART-free viral control and may help select candidates for analytic treatment interruption. We investigated predictors of HIV-1 DNA levels in older children and adolescents with perinatally acquired HIV who started ART early in life.
Methods:
Children older than 7 years and adolescents on ART and virally suppressed (<50 copies/mL) who started ART <3 months of age were recruited at sites in South Africa, Mozambique, Uganda, Mali, and Thailand. Previous viral rebound or ART interruption was allowed. HIV-1 DNA was measured in peripheral blood mononuclear cells using droplet-digital PCR. Associations between DNA levels and clinical factors were analyzed using descriptive statistics and χ 2 tests.
Results:
Among 89 participants (50.6% female), ART started at a median age of 66 days (IQR: 53-87) and current median age was 12.8 years (IQR: 9.6-16.7). Median HIV-1 DNA was 355 copies/10 6 cells (IQR: 151-912); 10.1% were undetectable (<1 copy/10 6 cells). Undetectable results were more frequent in those with ART interruption (21.7%) than continuous ART (6.1%), P = 0.0485. This was significant only in females (regardless of ART start age) and only in those who started ART < 60 days of age (regardless of sex).
Conclusions:
About 10% of early-treated children and adolescents suppressed on ART had HIV-1 DNA levels below the assay's detection threshold. Previous ART interruption was associated with a greater likelihood of undetectable HIV-1 DNA. These results provide support for the concept of "auto-immunization," where ART interruption may, in certain circumstances, enhance HIV immunity and promote ART-free control.
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