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Updated: May 8, 2026

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Untargeted Liquid Chromatography-Mass Spectrometry-Based Metabolomics Analysis of Wheat Grain
Published on: March 13, 2020
A novel hybrid NSGA-III and machine learning framework for modeling wheat yield variability using climatic, edaphic,
Mohsen Jahan1, Mohammad Bannayan2, Mehdi Nassiri-Mahallati2
1Department of Agrotechnology, Faculty of Agriculture, Ferdowsi University of Mashhad (FUM), P.O. Box 9177948978, Mashhad, Iran. jahan@ferdowsi.um.ac.ir.
Scientific Reports
|May 6, 2026
Summary
This study developed a hybrid model to predict irrigated wheat yield using climate, soil, and nutrient data. The model achieved moderate accuracy, highlighting regional differences and factor interactions for better crop management.
Area of Science:
- Agricultural Science
- Climate Science
- Data Science
Background:
- Accurate crop yield prediction is vital for food security and climate change adaptation.
- Agricultural systems face increasing vulnerability due to climate change.
- Understanding factors influencing crop yield is crucial for sustainable agriculture.
Purpose of the Study:
- To develop a hybrid modeling framework for predicting irrigated wheat yield.
- To identify key predictive features for wheat yield in Razavi Khorasan Province, Iran.
- To provide a decision-support tool for site-specific crop management and climate adaptation.
Main Methods:
- Utilized a hybrid modeling framework combining Mutual Information (MI), Recursive Feature Elimination (RFE), and NSGA-III for feature selection.
- Employed a Stacking Regressor meta-learner with LightGBM (LGBM) and Deep Neural Network (DNN) for yield prediction.
- Analyzed 47 variables from climatic, edaphic, and nutritional datasets spanning 2004-2023.
Main Results:
- Identified an optimal subset of 10 features, including temperature, soil properties, and nutrient levels, for wheat yield prediction.
- Achieved a test-set R-squared of 0.44, indicating moderate explained variance in a complex system.
- SHAP analysis revealed significant influence of regional heterogeneity and interactions between climatic, soil, and nutritional factors.
Conclusions:
- The hybrid optimization-learning pipeline effectively characterizes a substantial portion of wheat yield variation.
- The developed model serves as a practical decision-support tool for site-specific management and climate adaptation planning.
- Further research can refine models to capture remaining variability for enhanced agricultural resilience.
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