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Updated: May 8, 2026

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Systematic Scoring Analysis for Intestinal Inflammation in a Murine Dextran Sodium Sulfate-Induced Colitis Model
Published on: February 14, 2021
Deep Learning-Driven Analysis and Quantification of Histopathologic Features in a Dextran Sulfate Sodium-Induced
Arno Doelemeyer1, Grazyna Wieczorek2, Jonas Zierer2
1Diseases of Aging and Regenerative Medicine, Biomedical Research, Novartis Pharma AG, Basel, Switzerland.
The American Journal of Pathology
|May 7, 2026
Summary
Artificial intelligence (AI) tools can now quantify colitis in mouse models. This digital pathology approach offers a more sensitive and less biased assessment of tissue damage compared to human analysis, aiding drug discovery.
Area of Science:
- Veterinary Pathology
- Digital Pathology
- Artificial Intelligence in Medicine
Background:
- Dextran sodium sulfate (DSS)-induced colitis models are crucial for studying inflammatory bowel disease (IBD) pathophysiology.
- Histological scoring of colon sections in these models is vital but often subjective and time-consuming.
- Digital pathology offers potential solutions to enhance objectivity and efficiency in histological assessments.
Purpose of the Study:
- To develop and validate an AI-based deep learning classifier for quantifying histological features in a DSS-induced colitis mouse model.
- To assess the utility of AI in identifying and quantifying tissue damage, cell infiltration, and goblet cell numbers.
- To compare the sensitivity and accuracy of AI-driven assessments against traditional pathologist evaluations.
Main Methods:
- A deep learning classifier was trained using the HALO image analysis platform on colon sections from a DSS-induced colitis mouse model.
- The AI sequentially identified tissue layers (tissues, mucosa, submucosa, lymphoid tissues).
- AI quantified tissue damage, cell infiltration, goblet cell counts, and nuclear phenotypes.
Main Results:
- AI-based classifiers accurately identified key pathological features and disease progression in the colitis model.
- AI assessments demonstrated high correlation and superior sensitivity in detecting histopathological changes compared to pathologist assessments.
- The AI approach successfully detected the alleviation of tissue damage.
Conclusions:
- Machine learning-based classifiers are efficient for characterizing disease pathology in preclinical models.
- AI-driven digital pathology provides a quantitative, sensitive, and unbiased tool for histological assessment.
- This technology shows significant utility in the early stages of drug discovery for inflammatory bowel disease.

