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DeepBCTPred: deep learning-based prediction of bladder cancer tissues from endoscopic images
Md Muhaiminul Islam Nafi1,2, Khandokar Md Rahat Hossain1,2
1Department of Computer Science and Engineering, Bangladesh University of Engineering and Technology, Dhaka 1000, Bangladesh.
Bioinformatics Advances
|May 7, 2026
Summary
DeepBCTPred, a novel deep learning framework, accurately classifies bladder cancer tissue, improving diagnostic precision. This AI tool offers high recall and specificity, outperforming current methods for better patient outcomes.
Area of Science:
- Oncology
- Artificial Intelligence
- Medical Imaging
Background:
- Bladder cancer is a prevalent malignancy with diagnostic challenges due to subjective interpretation of conventional methods.
- Accurate tissue classification is crucial for early diagnosis, patient survival, and quality of life.
- Existing diagnostic techniques are limited by subjectivity and potential for human error.
Purpose of the Study:
- To develop and evaluate DeepBCTPred, a novel deep learning framework for accurate bladder cancer tissue classification.
- To integrate handcrafted and learned features using a dual-branch architecture for enhanced diagnostic performance.
- To improve upon the accuracy and reliability of current bladder cancer diagnostic methods.
Main Methods:
- A dual-branch deep learning architecture combining MobileNetV3 and a Feedforward Neural Network was developed.
- Recursive Feature Elimination (RFE) was employed for effective feature selection.
- A genetic algorithm-based image generation pipeline was utilized for optimal data selection and augmentation.
Main Results:
- DeepBCTPred achieved high performance metrics: 98.74% recall, 99.45% specificity, and 97.96% F1-score on the test dataset.
- The framework significantly outperformed existing state-of-the-art methods, with recall improvements of 2%-15%.
- Substantial gains were observed in F1-score (1.3%-13.1%) and Matthews Correlation Coefficient (MCC) (1.5%-16%).
Conclusions:
- DeepBCTPred demonstrates superior performance in bladder cancer tissue classification, offering a significant advancement over current methods.
- The framework shows strong potential for clinical implementation in bladder cancer diagnosis.
- The developed deep learning approach may be extensible to other cancer types, contributing to precision medicine applications.