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Updated: May 10, 2026

Targeted Next-generation Sequencing and Bioinformatics Pipeline to Evaluate Genetic Determinants of Constitutional Disease
Published on: April 4, 2018
An integrated cardiometabolic genetic testing program in a predominantly Hispanic population within a community
Bo Yuan1, Layla A Abushamat2, Stacey Pereira3
1Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX; Baylor Genetics, Houston, TX.
Cardiometabolic genetic testing in a Hispanic community identified pathogenic variants and risk alleles, offering actionable insights for disease prevention and management. Patients found the genetic testing beneficial with minimal concerns.
Area of Science:
- Cardiovascular Genetics
- Metabolic Disorders
- Genomic Medicine
Background:
- Cardiometabolic disorders pose a significant health burden, particularly in diverse populations.
- Genetic testing offers potential for personalized risk assessment and management.
- Limited data exists on implementing genetic testing in community settings for Hispanic populations.
Purpose of the Study:
- To implement and evaluate cardiometabolic genetic testing in a community setting with a predominantly Hispanic population.
- To assess the feasibility and patient perspectives regarding genetic testing for cardiometabolic conditions.
- To identify genetic risk factors for monogenic diseases, pharmacogenomic insights, and polygenic risk scores.
Main Methods:
- Genome sequencing (GS)-based genetic panel for cardiometabolic disorders deployed in community clinics.
- Included 177 genes for monogenic conditions, LPA risk alleles, pharmacogenomic (PGx) loci, and polygenic risk scores (PRS) for type 2 diabetes (T2D) and coronary artery disease (CAD).
- A survey assessed patient perceptions after results were returned.
Main Results:
- 776 patients (92% Hispanic) completed testing.
- 3.4% identified with pathogenic/likely pathogenic variants in monogenic disease genes (diagnostic and secondary findings).
- Significant proportions identified with LPA risk alleles (37.5%), PGx findings (23.3%), and elevated PRS (38.4%).
Conclusions:
- Cardiometabolic genetic testing is feasible and beneficial in a community setting for a predominantly Hispanic population.
- Testing provides actionable guidance for diagnosis, intervention, and preventative care.
- Patients reported favorable perceptions and perceived benefits from the genetic testing.
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