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Updated: May 12, 2026

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Formation of Human Thymus Organoids in Three-Dimensional Fibrin Hydrogels
Published on: October 4, 2024
Generation of Functional Patient-Specific Thymus Organoids From Human Pluripotent Stem Cells (hPSCs) Using Air-Liquid
Stephan A Ramos1, Holger A Russ2,3
1Department of Developmental Biology, Stanford School of Medicine; Stanford, CA, USA.
Bio-Protocol
|May 11, 2026
Summary
Researchers developed functional, isogenic stem cell-derived thymic organoids (sTOs) for regenerative medicine. These patient-specific organoids support human T-cell development and maturation in vitro, offering a new approach for studying thymic function.
Area of Science:
- Immunology
- Regenerative Medicine
- Developmental Biology
Background:
- The thymus is essential for adaptive immunity but declines with age, impacting T-cell production.
- Current methods for generating functional thymic tissue from human pluripotent stem cells (hPSCs) have limitations, including reliance on external tissues and lack of patient specificity.
- Previous work demonstrated differentiation of thymic epithelial progenitors (TEPs) but required in vivo maturation for functional thymic epithelial cells (TECs).
Purpose of the Study:
- To develop a reproducible protocol for generating functional, isogenic, patient-specific stem cell-derived thymic organoids (sTOs) in vitro.
- To create a system that supports the development and maturation of human thymic epithelial cells and T-cells from hPSCs.
- To enable in vitro studies of human thymic function, including T-cell development and selection.
Main Methods:
- Directed differentiation of hPSCs to generate thymic epithelial progenitors (TEPs), hematopoietic progenitor cells (HPCs), and mesenchymal cells from the same hPSC line.
- Generation of multicellular stem cell-derived thymic organoids (sTOs) by combining these differentiated cell types.
- Culture of sTOs at the air-liquid interface to support in vitro development.
Main Results:
- A revised protocol successfully generated functional, isogenic stem cell-derived thymic organoids (sTOs).
- The generated sTOs supported in vitro development and maturation of human thymic epithelial cells in a patient-specific manner.
- sTOs facilitated human T-cell development from co-cultured stem cell-derived hematopoietic progenitor cells.
- The organoids showed potential for supporting both positive and negative selection of developing T-cells in vitro.
Conclusions:
- Functional, multicellular stem cell-derived thymic organoids (sTOs) can be reproducibly generated from hPSCs.
- These patient-specific sTOs provide a valuable in vitro model for studying human thymic epithelial cell and T-cell development.
- sTOs hold promise for advancing regenerative medicine strategies and understanding thymic selection processes.
