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Structure-Based Design of UVRAG-BAX Binding Interface-Targeting Compound Induces Apoptosis and ROS in Breast Cancer
Shiv Kumar1, Raj Bahadur Singh1, Vikash Kumar Dubey1
1School of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi 221005 Uttar Pradesh, India.
Abstract:
Targeting protein-protein interaction interfaces has emerged as an effective strategy in modern anticancer drug discovery, as these interfaces regulate critical signaling pathways involved in tumor progression and survival. In this study, a structure-based strategy was used to identify potential small-molecule inhibitors targeting the interaction interface of the UVRAG-BAX protein complex. Initially, the interaction interface between UVRAG and BAX was characterized using protein-protein docking. Subsequently, virtual screening of compounds from the ZINC database was carried out, followed by molecular docking to identify molecules capable of binding to the targeted interface region. Cytotoxicity analysis using the MTT assay showed a potent inhibitory effect with an IC50 value of 5 ± 0.283 μM. Furthermore, mechanistic studies suggested that treatment with the compound significantly increased the intracellular level of reactive oxygen species causing apoptotic cell death, arrested the cell cycle in S phase and elevated the Sub G0 population in MCF-7 cells. Confocal microscopy using AO/DAPI staining further confirmed cell death in treated cells. These findings suggest that 1-[2-(4,11-dimethyl-2-oxo-6,7,8,9-tetrahydro-[1]benzofuro[3,2-g]chromen-3-yl)acetyl]-4-phenylpiperidine-4-carboxylic acid (ZINC000002107582) is a promising lead compound that targets the UVRAG interaction interface and exerts potent anticancer effects in breast cancer cells.
Insights
Researchers identified a novel small molecule targeting the UVRAG-BAX protein interaction. This compound shows potent anticancer activity by inducing apoptosis and cell cycle arrest in breast cancer cells.
Area of Science:
- Biochemistry
- Molecular Biology
- Pharmacology
Background:
- Protein-protein interactions are crucial in cancer signaling pathways.
- Targeting these interactions is a key strategy in anticancer drug discovery.
- The UVRAG-BAX protein complex is implicated in tumor progression.
Purpose of the Study:
- To identify small-molecule inhibitors of the UVRAG-BAX protein complex.
- To evaluate the anticancer potential of identified inhibitors.
- To elucidate the mechanism of action of lead compounds.
Main Methods:
- Structure-based drug design including protein-protein docking and virtual screening.
- Molecular docking to identify potential inhibitors from the ZINC database.
- MTT assay for cytotoxicity, cell cycle analysis, and confocal microscopy for apoptosis detection.
Main Results:
- A novel compound, ZINC000002107582, was identified as a potent inhibitor of the UVRAG-BAX interaction.
- The compound exhibited significant cytotoxicity against MCF-7 breast cancer cells with an IC50 of 5 ± 0.283 μM.
- Mechanistic studies revealed induction of reactive oxygen species, S-phase cell cycle arrest, and apoptosis.
Conclusions:
- The identified compound is a promising lead for developing novel anticancer therapeutics targeting the UVRAG-BAX interface.
- The compound effectively induces cancer cell death through apoptosis and cell cycle disruption.
- This study highlights the potential of targeting protein-protein interactions for breast cancer treatment.
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