High-resolution temporal biogeochemical variations in a seagrass-coral cohabitate ecosystem: day-night, rain, and...

Seagrass meadows and coral reefs are global hotspots for productivity, yet they are often studied in isolation despite their intense biogeochemical connectivity. Significant gaps remain in understanding how coupled inorganic and organic processes within the water column drive blue carbon services in such mixed habitats, particularly during rapid environmental disturbances. Here, we investigated a unique, intertwined ecosystem in the Dongsha Atoll, where massive Porites corals are distributed on seagrass meadows, creating a natural laboratory for studying water column carbon biogeochemistry. During a 10-day sampling period, we collected continuous hydrological and discrete biogeochemical data at two- to four-hour intervals. Our results reveal that the dissolved inorganic carbon (DIC) covaried with dissolved oxygen and pH in strong diurnal patterns, which were governed by photosynthesis and respiration. As an outcome, variable but mostly high pCO₂ values (141-2070 μatm) indicate the seagrass meadow was a source of CO₂ to the atmosphere due to strong night-time respiration. Particulate organic carbon (POC) increased with temperature but showed no diurnal pattern. Dissolved organic carbon (DOC) showed a weak diurnal pattern and was linked to variations in POC and total alkalinity, highlighting the tight coupling between the organic production of the meadow and the inorganic chemistry of the calcification framework. Additionally, coral spawning led to a surge in organic content and changed inorganic nutrient levels. Rainfall events significantly acidified the ocean and enhanced submarine groundwater discharge to the seagrass-coral habitat. The distinctive contributions of this study are the extremely high temporal resolution of discrete samples, allowing the simultaneous tracking of multiple organic and inorganic pools during natural disturbances. The high-resolution data provide fundamental information for parametrizing models that explain DIC, POC, and DOC, which yield insights into organic carbon cycling in seagrass meadow-coral habitats.