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Gradient boosting-based discrete failure time model for selecting time-varying effects and interactions
Lingfeng Luo1, Kevin He1, Jeremy M G Taylor2
1Department of Biostatistics, University of Michigan, Ann Arbor, MI, USA.
This study introduces a new gradient boosting method for analyzing cancer survival data. The approach effectively selects important risk factors, distinguishes time-varying effects, and identifies interactions, improving cancer management insights.
Area of Science:
- Biostatistics
- Survival Analysis
- Machine Learning
Background:
- Analyzing National Cancer Institute's Surveillance, Epidemiology, and End Results (SEER) Program data is crucial for cancer management.
- Challenges exist in variable selection, differentiating time-varying effects, and selecting interaction terms under hierarchy restrictions in survival models.
Purpose of the Study:
- To develop a novel coordinate ascent-based gradient boosting procedure for discrete failure time models.
- To address limitations in variable selection, time-varying effect differentiation, and interaction term selection in high-dimensional survival data.
Main Methods:
- A coordinate ascent-based gradient boosting procedure was developed for discrete failure time models.
- The method incorporates variable selection, distinguishes time-varying and time-independent effects, and handles interaction terms under hierarchy restrictions.
- It provides well-defined degrees of freedom for information-criteria-based stopping rules.
Main Results:
- The proposed method achieves effective variable selection in high-dimensional settings.
- It successfully differentiates between time-varying and time-independent variables and selects important interaction terms.
- Simulation studies demonstrated good selection performance, and application to SEER melanoma data identified key risk factors and interactions.
Conclusions:
- The developed gradient boosting procedure offers a robust solution for complex survival data analysis.
- It enhances the ability to identify prognostic factors and understand temporal effects in cancer research.
- This method provides improved tools for guiding cancer management strategies using SEER data.
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