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Somatic genomic profiling reveals clinically relevant heterogeneity in RAS-mutant sporadic medullary thyroid
Edoardo Ruggeri1,2, Simona Censi1,2, Loris Bertazza1,2
1Department of Medicine (DIMED), University of Padua, Padua, Italy.
Objective:
Sporadic medullary thyroid carcinoma (sMTC) is predominantly driven by somatic RET or RAS mutations, although the molecular basis of disease heterogeneity remains incompletely understood. Our study aims to characterize molecular heterogeneity in sMTC in order to identify pathways that may improve patient's stratification and support more personalized clinical management strategies.
Methods:
Deep targeted next-generation sequencing of 31 neuroendocrine- and cancer-related genes was performed on tumor samples from 94 patients with sMTC to characterize the somatic mutational landscape beyond canonical drivers.
Results:
RET and RAS mutations were detected in 53% and 29% of cases, respectively, while 18% of tumors lacked both alterations. Variant allele frequency (VAF) analysis demonstrated a significant positive correlation between driver mutation burden and tumor size in both RET- and RAS-mutant tumors, supporting the clonal contribution of these alterations. Additional oncogenic variants were identified in genes involved in DNA damage response and epigenetic regulation, including ATM and KMT2A. Notably, within the RAS-mutant subgroup, the presence of co-occurring oncogenic alterations was associated with more advanced T status (T3-T4, p = 0.0181) at diagnosis and lower biochemical cure rates (p = 0.02) at the follow-up compared with tumors harboring isolated RAS mutations, supporting the clinical relevance of extended genomic profiling in RAS-mutant sMTC.
Conclusions:
Overall, these findings highlight additional oncogenic alterations potentially involved in tumor progression and suggest that extended targeted profiling may provide clinically relevant information on molecular heterogeneity in sMTC, particularly within RAS-mutant tumors.
Insights
This study reveals that sporadic medullary thyroid carcinoma (sMTC) has more genetic drivers than previously known. Extended genomic profiling in RET- and RAS-mutant sMTC can improve patient stratification and personalized treatment strategies.
Area of Science:
- Oncology
- Genetics
- Molecular Biology
Background:
- Sporadic medullary thyroid carcinoma (sMTC) is primarily driven by RET or RAS mutations.
- The full spectrum of molecular drivers and their role in sMTC heterogeneity is not well understood.
Purpose of the Study:
- To characterize the molecular heterogeneity of sporadic medullary thyroid carcinoma (sMTC).
- To identify molecular pathways for improved patient stratification and personalized clinical management.
Main Methods:
- Deep targeted next-generation sequencing of 31 cancer-related genes was performed on 94 sMTC tumor samples.
- Analysis included somatic mutational landscape, variant allele frequency, and correlation with clinical parameters.
Main Results:
- RET and RAS mutations were found in 53% and 29% of tumors, respectively; 18% lacked both.
- Driver mutation burden correlated positively with tumor size.
- Additional oncogenic variants in DNA damage response (e.g., ATM) and epigenetic regulation (e.g., KMT2A) genes were identified.
- In RAS-mutant sMTC, co-occurring alterations were linked to advanced T status and lower cure rates.
Conclusions:
- Extended targeted profiling reveals clinically relevant molecular heterogeneity in sMTC.
- Findings particularly highlight the importance of comprehensive genomic analysis in RAS-mutant sMTC for personalized treatment.
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