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Updated: May 19, 2026

Capsular Serotyping of Streptococcus pneumoniae Using the Quellung Reaction
Published on: February 24, 2014
Global mapping of Streptococcus pneumoniae sequence types associated with multidrug resistance and capsular
Samuel A Akwetey1, Akosua B Karikari2, Onyasaniba K Ntim3
1Department of Medical Microbiology, University of Ghana Medical School, Accra, Ghana; Department of Clinical Microbiology, School of Medicine, University for Development Studies, Tamale, Ghana.
Background:
Streptococcus pneumoniae is a significant bacterial pathogen responsible for invasive and non-invasive infections. One of its most concerning traits is capsular switching, which may contribute to multidrug resistance (MDR) and emergence of difficult-to-treat infections. This systematic review examined the sequence types of S. pneumoniae associated with MDR and/or capsular switching, focusing on their genetic relatedness.
Methodology:
A systematic review was conducted following PRISMA guidelines and registered in PROSPERO. A comprehensive literature search was performed across PubMed, Scopus, and Web of Science. Studies published between 1991 and 2024 were screened based on predefined inclusion criteria. Eligible studies documented sequence types associated with MDR and/or capsular switching.
Results:
Through a review of 133 studies across 152 countries, we identified dominant MDR sequence types: ST177, ST63, ST199, ST156, ST242, and ST338, and their genetic relationships with other MDR lineages. Notably, we compiled 390 documented capsular switching events spanning 184 distinct sequence types, providing a broad global synthesis of capsular switching in S. pneumoniae. We observed common trends of switching from vaccine to non-vaccine serotypes, alongside within-serogroup switching and within-vaccine group switching, predominantly in the post-vaccination era.
Conclusion:
Findings underscore a rapidly evolving genetic landscape of S. pneumoniae, in which MDR lineages diversify through capsular switching and serotype replacement. Despite (Pneumococcal Conjugate Vaccine) PCV introduction, vaccine-type MDR clones persist, raising concerns for serotypes such as 3, 6A/B, 19F, 14, and 23F. In addition, the global distribution and MDR profiles of ST320 and ST271 support their consideration as potential new (Pneumococcal Molecular Epidemiology Network) PMEN clone candidates, reinforcing the need for sustained genomic surveillance in the post-PCV era.
Insights
Streptococcus pneumoniae evolves rapidly through capsular switching, leading to multidrug resistance (MDR). This review highlights key MDR sequence types and switching events, emphasizing the need for ongoing genomic surveillance post-vaccine introduction.
Area of Science:
- Microbiology
- Genomics
- Epidemiology
Background:
- Streptococcus pneumoniae causes significant invasive and non-invasive infections.
- Capsular switching in S. pneumoniae contributes to multidrug resistance (MDR) and difficult-to-treat infections.
Purpose of the Study:
- To systematically review sequence types of S. pneumoniae associated with MDR and/or capsular switching.
- To analyze the genetic relatedness of these sequence types.
Main Methods:
- Systematic review following PRISMA guidelines.
- Comprehensive literature search of PubMed, Scopus, and Web of Science (1991-2024).
- Screening of studies documenting sequence types linked to MDR and/or capsular switching.
Main Results:
- Identified dominant MDR sequence types: ST177, ST63, ST199, ST156, ST242, and ST338.
- Compiled 390 capsular switching events across 184 sequence types globally.
- Observed trends of switching from vaccine to non-vaccine serotypes, especially post-vaccination.
Conclusions:
- MDR S. pneumoniae lineages diversify via capsular switching and serotype replacement.
- Vaccine-type MDR clones persist post-Pneumococcal Conjugate Vaccine (PCV) introduction, concerning serotypes 3, 6A/B, 19F, 14, and 23F.
- ST320 and ST271 are potential new Pneumococcal Molecular Epidemiology Network (PMEN) clone candidates, necessitating continued genomic surveillance.
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