Oxford Nanopore Technologies RNA sequencing data for investigating epigenetic regulation by phase-variable DNA

Alice Ascari1, Luke V Blakeway1, Calum J Walsh2

  • 1Institute for Biomedicine and Glycomics, Griffith University, Gold Coast, Queensland, Australia.

Insights

Neisseria meningitidis causes meningitis and septicemia globally. This study used RNA sequencing to analyze strain M0579, revealing the epigenetic regulator ModD1 in hyperinvasive meningococcal B lineages.

Area of Science:

  • Microbiology
  • Genomics
  • Epigenetics

Background:

  • Neisseria meningitidis is a major cause of bacterial meningitis and septicemia.
  • This bacterium poses a significant global public health threat.
  • Serogroup B strains are particularly concerning due to their invasive potential.

Purpose of the Study:

  • To perform RNA sequencing on Neisseria meningitidis serogroup B strain M0579.
  • To investigate the role of epigenetic regulators in hyperinvasive meningococcal strains.
  • To characterize the expression profile of the ModD1 gene.

Main Methods:

  • Oxford Nanopore Technologies RNA sequencing was employed.
  • Analysis focused on Neisseria meningitidis serogroup B strain M0579.
  • The study specifically examined the DNA methyltransferase ModD1.

Main Results:

  • The RNA sequencing data provided a comprehensive transcriptomic profile of the strain.
  • The presence and potential function of the phase-variable DNA methyltransferase ModD1 were confirmed.
  • ModD1 was identified as an epigenetic regulator potentially linked to hyperinvasiveness.

Conclusions:

  • The study provides valuable transcriptomic data for Neisseria meningitidis serogroup B.
  • The findings highlight the potential role of ModD1 in the pathogenesis of invasive meningococcal disease.
  • Further research into ModD1 could offer new therapeutic targets.