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Amide Coupling Reaction for the Synthesis of Bispyridine-based Ligands and Their Complexation to Platinum as Dinuclear Anticancer Agents
Published on: May 28, 2014
Structure and intermolecular interactions of the rare amide-pyridine synthon: a cocrystal of nicotinamide and
Oluwatoyin Akerele1, Andreas Lemmerer1
1Jan Boeyens Structural Chemistry Laboratory, Molecular Sciences Institute, School of Chemistry, University of the Witwatersrand, Private Bag 3, PO Wits, 2050, Johannesburg, South Africa.
Abstract:
Nicotinamide (Nico) and derivatives of pyridine are important materials in both the pharmaceutical and agrochemical industries. In the 21st century, pyridine-based agrochemical products achieved commercial success because of their structural diversity and different modes of action that can be explored to improve the effectiveness of the compounds. In this article, we explore the cocrystallization of nicotinamide/isonicotinamide and substituted pyridines and their synthons to understand their ease of formation. A cocrystal of Nico and 2-chloro-3-hydroxypyridine (2Cl3OHPY) was synthesized using solution and mechanochemical methods, and characterized by X-ray diffraction. The structural stability and intermolecular interaction of the (Nico)·(2Cl3OHPY) cocrystal were investigated using differential scanning calorimetry (DSC) and density functional theory (DFT). The cocrystal has strong chain (N-H...N), dimer (N-H...O) and discrete (N-H...O) hydrogen bonds with energy strengths of -31.21, -66.99 and -36.82 kJ mol-1, respectively, and a short C-H...π bond that builds a twisted three-dimensional structure (viewed along the c axis) and stabilizes the crystal packing. The results show that the compound is chemically stable, and the two dominating interactions are electrostatic and dispersion energies. An analysis of the aromatic amide and pyridine synthon in the CSD reveals the presence of close supporting interactions that strengthen the N-H...N hydrogen bond. The understanding of the structural properties and intermolecular interactions in the (Nico)·(2Cl3OHPY) cocrystal and NH2...Npy synthon provided in this study could be used to design materials for different applications, including pigments, explosives, drugs, agrochemicals and food additives.
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