Further delineation of the phenotype and genotype in a newly identified PAN2-related disorder
Erdem Kındış1,2, Elif Eviz3, Serdar Ceylaner4
1Medical Genetics Clinic, Şanlıurfa Training and Research Hospital, Şanlıurfa, Türkiye. erdem9217@gmail.com.
Abstract:
Regulation of mRNA decay is a critical mechanism for effective gene expression. Poly(A) tail length is directly associated with mRNA stability, and deadenylation, which shortens poly(A) tails, plays a central role in mRNA regulation. PAN2 encodes a key component of the deadenylation machinery. Recently, loss-of-function variants in PAN2 have been associated with neurodevelopmental delay and multiple congenital anomalies in seven patients from five unrelated families. Here, we report two siblings presenting with neurodevelopmental delay and multiple congenital anomalies consistent with previously described PAN2-related cases. Notably, both siblings also exhibited esophageal atresia (EA) and developmental dysplasia of the hip (DDH). Whole-exome sequencing (WES) in the older sibling identified a novel homozygous nonsense variant in PAN2, c.1432C>T (p.Arg478Ter). Segregation analysis confirmed homozygosity in the affected sibling, remaining family members were carrier. This study expands the genotypic spectrum of PAN2-related disorder and suggests additional clinical features contributing to this newly emerging disorder.
Insights
Loss-of-function variants in the PAN2 gene cause a rare neurodevelopmental disorder. This study identifies new cases with esophageal atresia and hip dysplasia, expanding the known clinical features of PAN2-related disease.
Area of Science:
- Molecular Biology
- Genetics
- Developmental Biology
Background:
- mRNA decay is crucial for gene expression, with poly(A) tail shortening (deadenylation) playing a central role.
- The PAN2 gene encodes a key protein in the deadenylation pathway.
- Previous studies linked PAN2 loss-of-function variants to neurodevelopmental delay and congenital anomalies.
Purpose of the Study:
- To report two siblings with neurodevelopmental delay and congenital anomalies consistent with PAN2-related disorder.
- To identify the genetic cause in these siblings.
- To expand the understanding of the clinical and genotypic spectrum of PAN2-related disorder.
Main Methods:
- Clinical evaluation of two siblings presenting with neurodevelopmental delay and congenital anomalies.
- Whole-exome sequencing (WES) to identify genetic variants.
- Segregation analysis to confirm variant inheritance.
Main Results:
- The siblings presented with neurodevelopmental delay, multiple congenital anomalies, esophageal atresia (EA), and developmental dysplasia of the hip (DDH).
- WES identified a novel homozygous nonsense variant in PAN2 (c.1432C>T, p.Arg478Ter) in the affected sibling.
- Segregation analysis confirmed the variant was homozygous in the affected sibling and carried by unaffected family members.
Conclusions:
- This study expands the genotypic spectrum of PAN2-related disorder.
- Esophageal atresia and developmental dysplasia of the hip are suggested as additional clinical features of this emerging disorder.
- Further research is needed to fully elucidate the role of PAN2 in development and disease.
Related Concept Videos
Pleiotropy
Pedigree Analysis
Incomplete Dominance
Punnett Squares
Sex-linked Disorders
Sex Linked Disorders


