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Updated: May 21, 2026

A Comparative Approach to Characterize the Landscape of Host-Pathogen Protein-Protein Interactions
Published on: July 18, 2013
HPV16 E2 protein possesses intrinsic helicase activity and sterically hinders E1 function through direct interaction.
Ping Xu1, Shuning Cai1, Lihong Zhang1
1BAICSM, State Key Laboratory of Green Biomanufacturing, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, China.
Human papillomavirus type 16 (HPV16) E2 protein exhibits novel ATP-dependent DNA unwinding activity. This finding reveals E2 as a potential antiviral target and uncovers a new regulatory mechanism in viral DNA replication.
Area of Science:
- Molecular Biology
- Virology
- Biochemistry
Background:
- Human papillomavirus type 16 (HPV16) E2 protein is crucial for viral replication.
- Previously, no enzymatic activity was attributed to the HPV16 E2 protein.
Purpose of the Study:
- To investigate the enzymatic activities of the HPV16 E2 protein.
- To identify potential antiviral targets and regulatory mechanisms in HPV replication.
Main Methods:
- Assessed ATP-dependent DNA unwinding activity of HPV16 E2.
- Performed mutational analysis to identify critical residues for helicase function.
- Investigated the interaction of podophyllotoxin with E2 and its effect on unwinding activity.
- Compared E2's helicase and ATPase activities with HPV16 E1.
- Examined the inhibitory effect of E2 on E1 helicase activity.
Main Results:
- HPV16 E2 protein possesses intrinsic ATP-dependent DNA unwinding (helicase) activity.
- Residues K299, Y303, and K306 are critical for E2's helicase function.
- Podophyllotoxin inhibits E2 unwinding activity (IC50 = 0.11±0.03 μM), involving residues Q320 and H342.
- E2's ATPase and helicase activities are weaker than E1's.
- E2 potently inhibits E1 helicase activity via its N-terminal domain (aa 1-245), involving residue E39.
Conclusions:
- The study uncovers a previously unrecognized helicase function for HPV16 E2 protein.
- E2 is a potential antiviral target due to its enzymatic activity.
- E2's inhibition of E1 reveals a novel regulatory mechanism in HPV DNA replication.
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