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Updated: May 23, 2026

Determining 3'-Termini and Sequences of Nascent Single-Stranded Viral DNA Molecules during HIV-1 Reverse Transcription in Infected Cells
Published on: January 30, 2019
DNA polymerization activates RNA cleavage of a reverse transcriptase-like antiviral enzyme
Xuejun Rong1, Jun Xiao2, Xinyuan Zhao1
1Key Laboratory of Molecular Biophysics, the Ministry of Education, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China.
Defense-associated reverse transcriptases (DRTs) use unique DNA polymerase and exonuclease activities to detect phage infections. This triggers RNA endonuclease activity, degrading RNA to halt infection, revealing a novel nucleic acid defense mechanism.
Area of Science:
- Molecular Biology
- Biochemistry
- Genetics
Background:
- Defense-associated reverse transcriptases (DRTs) are known to transcribe noncoding RNAs for antiviral defense.
- The mechanisms of DRTs that operate independently of noncoding RNAs are not well understood.
Purpose of the Study:
- To elucidate the mechanism of ncRNA-independent antiphage defense mediated by DRT4.
- To characterize the enzymatic activities of DRT4 in the context of phage defense.
Main Methods:
- Enzymatic assays to assess DNA polymerase, exonuclease, and RNA endonuclease activities of DRT4.
- Analysis of DRT4's response to varying deoxyribonucleotide triphosphate (dNTP) levels.
- Investigation of factors influencing DRT4's RNA endonuclease activation.
Main Results:
- DRT4 integrates DNA polymerase, exonuclease, and RNA endonuclease activities for antiphage defense.
- An equilibrium between DRT4's DNA polymerase and exonuclease activities senses phage infection via dNTP levels.
- Activated DRT4 RNA endonuclease cleaves phage and host RNA, terminating infection by excising 3'-guanosine monophosphate.
Conclusions:
- DRT4 employs a novel strategy combining nucleic acid synthesis and degradation for defense.
- This mechanism expands the known functions of DRTs and suggests potential applications in DNA- and RNA-processing technologies.
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