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Conducting Multiple Imaging Modes with One Fluorescence Microscope
Published on: October 28, 2018
Smart event-triggered MINFLUX microscopy to catch and follow rare events
Jonatan Alvelid1,2,3, Agnes Koerfer4,5, Christian Eggeling6,7,8
1Institute for Applied Optics and Biophysics, Friedrich Schiller University Jena, Jena, Germany. jonatan.alvelid@scilifelab.se.
Nature Communications
|May 21, 2026
Summary
Event-triggered MINFLUX microscopy speeds up data acquisition for live cellular processes. This smart method uses real-time analysis to apply high-resolution imaging only when needed, overcoming previous limitations.
Area of Science:
- Biophysics
- Cell Biology
- Microscopy
Background:
- MINFLUX microscopy offers unparalleled spatial and temporal resolution for molecular studies.
- Current MINFLUX acquisition times are lengthy, limiting its application for dynamic cellular processes.
- Manual control restricts the efficiency and scope of MINFLUX applications in live-cell imaging.
Purpose of the Study:
- To develop an automated, event-triggered MINFLUX microscopy method to overcome acquisition speed limitations.
- To enable high-resolution imaging of dynamic cellular events in real-time.
- To expand the applicability of MINFLUX for studying complex biological processes.
Main Methods:
- Developed event-triggered MINFLUX using confocal monitoring and real-time image analysis.
- Implemented an open-source Python framework for automated control of a commercial MINFLUX microscope.
- Applied the method to investigate membrane dynamics during caveolae formation, endocytosis, and HIV-1 budding.
Main Results:
- Successfully triggered MINFLUX acquisition based on real-time detection of cellular events.
- Achieved high-resolution 2D and 3D imaging of molecular membrane dynamics during critical cellular processes.
- Acquired data previously unfeasible with manual microscope control, demonstrating significantly improved efficiency.
Conclusions:
- Event-triggered MINFLUX significantly enhances acquisition speed and data throughput for live-cell imaging.
- This smart microscopy approach enables the study of transient molecular events with unprecedented detail.
- The developed open-source framework democratizes advanced MINFLUX applications in cell biology and biophysics.

