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Updated: May 23, 2026

Protein Target Prediction and Validation of Small Molecule Compound
Published on: February 23, 2024
Identification of putative inhibitors of human pancreatic α-amylase from phytochemicals using molecular docking and
Mujahid Jalal1, Muhammad Hasnat1, Ayisha Khalid2
1Institute of Pharmaceutical Sciences (IPS), University of Veterinary and Animal Sciences (UVAS), Lahore, Pakistan.
Background:
Diabetes mellitus is a global chronic metabolic disorder characterized by elevated blood glucose levels, primarily due to impaired insulin activity or secretion. α-amylase, a key enzyme in carbohydrate digestion, is a validated molecular target for controlling postprandial hyperglycemia in type 2 diabetes.
Objectives:
This study aimed to identify potential α-amylase inhibitors from phytochemicals derived from Bauhinia forficata, Citrus spp. and Echinops ritro using an in-silico approach.
Methods:
A total of 55 phytochemicals were virtually screened against human pancreatic α-amylase (PDB ID: 3BAJ) using molecular docking via Schrödinger Maestro (version 12.5). The top-ranked ligands were further assessed for pharmacokinetic and toxicity profiles using SwissADME, ProTox-II and StopTox platforms. Electronic reactivity was evaluated using Density Functional Theory (DFT) with Gaussian 09.
Results:
Among the screened compounds, kaempferitrin (-10.3 kcal/mol), Rutin (-10.1 kcal/mol), Naringin (-9.7 kcal/mol) and Hyperoside (-9.6 kcal/mol) demonstrated strong binding affinities, favorable pharmacokinetic properties and compliance with drug-likeness criteria. DFT analysis supported their chemical reactivity and stability, indicating potential for biological activity.
Conclusion:
The results suggest that these phytochemicals could serve as promising lead molecules for the development of plant-based antidiabetic drugs targeting α-amylase. However, further experimental validation and mechanistic studies are recommended to confirm these findings.
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