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Assessing Plausibility of Clinical Fact Dates in Real World Data
Matthias Hüser1, Lydia González1, Matvey B Palchuk1
1TriNetX, LLC, Cambridge, Massachusetts, USA.
We developed a method using Jensen-Shannon divergence to check clinical data timestamps. This approach finds abnormal date patterns in healthcare data, improving data quality.
Area of Science:
- Data Science
- Health Informatics
- Biostatistics
Background:
- Clinical data quality is crucial for research and healthcare.
- Federated healthcare datasets present unique data integrity challenges.
- Timestamp accuracy is a key component of clinical data reliability.
Purpose of the Study:
- To introduce a quantitative framework for assessing timestamp plausibility in real-world clinical data.
- To apply this framework to identify data quality issues within a large federated network.
- To demonstrate the utility of the Jensen-Shannon divergence for anomaly detection in healthcare data.
Main Methods:
- A quantitative framework was developed utilizing the Jensen-Shannon divergence.
- The framework was applied to analyze encounter start dates across the TriNetX US network.
- Abnormal patterns were identified based on statistical divergence metrics.
Main Results:
- The Jensen-Shannon divergence successfully identified healthcare organizations exhibiting abnormal date patterns.
- Date binning or clustering, indicative of potential data quality issues, was detected.
- The method proved effective in highlighting anomalies within the federated network.
Conclusions:
- The proposed framework offers a simple yet effective method for timestamp plausibility assessment.
- This approach facilitates systematic detection of anomalies in federated healthcare datasets.
- Continuous data quality improvement can be supported through this quantitative analysis.
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