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Published on: September 20, 2018
Explainable Framework for Ontology-Based Similarity: A Use Case on SNOMED CT
Alexis Baudin1,2,3, Christophe Gaudet-Blavignac1,2, Christian Lovis1,2
1Division of Medical Information Sciences, Geneva University Hospitals, Geneva, Switzerland.
This study introduces an explainable similarity framework for healthcare ontologies, providing justified scores and readable paths. This enhances trust and usability in clinical data interoperability.
Area of Science:
- Biomedical Informatics
- Artificial Intelligence in Healthcare
- Clinical Data Management
Background:
- Semantic interoperability in healthcare relies on efficient concept manipulation in ontologies.
- Current ontology similarity functions lack actionable justification, hindering clinical trust and workflow integration.
Purpose of the Study:
- To develop an explainable similarity framework for healthcare ontologies.
- To enhance the trust and utility of similarity computations in clinical workflows.
Main Methods:
- Introduced a novel framework providing similarity scores with named pivots and readable concept-to-pivot paths.
- Combined intrinsic topological specificity and path-length proximity for pivot contribution.
- Utilized SNOMED CT for qualitative case analysis.
Main Results:
- Achieved an internal AUC of 0.998, comparable to classical measures.
- Demonstrated specific pivots for clinically close concept pairs and broader pivots for distant pairs.
- Explainability metrics showed shorter paths, deeper pivots, and higher pivot impact for closely related concepts.
Conclusions:
- The proposed framework offers explainable similarity scores and justifications for clinical data.
- Enhanced explainability improves the trustworthiness and applicability of ontology similarity in healthcare.
- This approach supports semantic interoperability by providing actionable insights into concept relationships.
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