Related Experiment Video
Updated: May 26, 2026

07:35
A Knowledge Graph Approach to Elucidate the Role of Organellar Pathways in Disease via Biomedical Reports
Published on: October 13, 2023
Global knowledge graph of osteoporosis biomarkers based on large language model embeddings and complex network
Qizhi Tan1, Wenchu Liang2, Manting Liu1
1Guangzhou University of Chinese Medicine, Guangzhou, China.
Frontiers in Endocrinology
|May 25, 2026
Summary
Advanced AI reveals new osteoporosis biomarkers. This study maps research trends, identifying inflammation, gut microbiota, and novel molecular targets for early detection and treatment.
Area of Science:
- Biomedical research
- Artificial Intelligence
- Bibliometrics
Background:
- Osteoporosis (OP) research is evolving beyond single-hormone mechanisms.
- Understanding the complex network of OP biomarkers is crucial for clinical advancement.
Purpose of the Study:
- To reconstruct the global research landscape of osteoporosis (OP) biomarkers using AI.
- To predict emerging OP biomarker nodes with potential clinical value.
Main Methods:
- Utilized Web of Science and PubMed literature (20 years).
- Employed OpenAI text-embedding-3-large for semantic mapping and Gemini 2.5 Pro for knowledge graph construction.
- Applied Walktrap community detection and Callon strategic diagrams to identify key research themes and emerging nodes.
Main Results:
- Identified nine major research themes, highlighting inflammation, immune regulation, detection technologies, biosensing, gut microbiota, and metabolism as high-potential domains.
- Revealed oxidative stress as a central bridging node in OP research.
- Discovered emerging biomarkers (lncRNA MEG3, miR-21-5p, spermidine, Treg-Exo) and imaging innovations (opportunistic CT, bone marrow PDFF).
Conclusions:
- AI and network algorithms offer a systematic approach to uncover latent knowledge in OP biomarker research.
- Identified emerging nodes provide guidance for precision screening (liquid biopsy, radiation-free imaging) and novel therapies (exosomes, gut-bone axis interventions).
Related Concept Videos
Osteoclasts in Bone Remodeling
Osteoclasts are cells responsible for bone resorption and remodeling. They originate from hematopoietic progenitor cells present in the bone marrow. Numerous progenitor cells fuse to form multinucleated cells, each with 10-20 nuclei. A single osteoclast has a diameter of 150 to 200 µM. These cells have ruffled borders that break down the underlying bone tissue and release minerals such as calcium into the blood in bone resorption. Osteoclasts cling to bones with their ruffled edges during bone...
Protein Networks
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
Protein Networks
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
Hormones and Bone Tissue
The endocrine system produces and secretes hormones, which interact with the skeletal system. These hormones control bone growth, maintain bone once it is formed, and remodel it.
Hormones That Influence Osteoblasts and/or Maintain the Matrix
Several hormones are necessary for controlling bone growth and maintaining the bone matrix. The pituitary gland secretes growth hormone (GH), which, as its name implies, controls bone growth. This happens in several ways: first, it triggers chondrocyte...
Hormones That Influence Osteoblasts and/or Maintain the Matrix
Several hormones are necessary for controlling bone growth and maintaining the bone matrix. The pituitary gland secretes growth hormone (GH), which, as its name implies, controls bone growth. This happens in several ways: first, it triggers chondrocyte...
Classification of Bones
The bones of the human skeletal system are of varied shapes, sizes, and functions. They can be classified based on their shape and function into four major classes: long bones, short bones, flat bones, and irregular bones. Some classifications include a fifth type, the sesamoid bones, as a separate class, whereas others categorize them under short bones.
Long and Short Bones
The appendicular skeleton, particularly the upper and lower limbs, is primarily made of long and short bones. The long...
Long and Short Bones
The appendicular skeleton, particularly the upper and lower limbs, is primarily made of long and short bones. The long...
Bone Remodeling and Repair
Osteoclasts are cells responsible for bone resorption and remodeling. They originate from hematopoietic progenitor cells present in the bone marrow. Numerous progenitor cells fuse to form multinucleated cells, each with 10-20 nuclei. A single osteoclast has a diameter of 150 to 200 µM. These cells have ruffled borders that break down the underlying bone tissue and release minerals such as calcium into the blood in bone resorption. Osteoclasts cling to bones with their ruffled edges during bone...