Related Experiment Video
Updated: May 28, 2026

12:29
Live Imaging of Antifungal Activity by Human Primary Neutrophils and Monocytes in Response to A. fumigatus
Published on: April 19, 2017
Artifact-Aware Fungal Detection in Dermatophytosis: A Transformer-Based Approach for KOH Microscopy
Rana Gursoy1, Abdurrahim Yilmaz2, Baris Kizilyaprak3
1Department of Mechatronics Engineering, Yildiz Technical University, Istanbul 34220, Turkey.
Bioengineering (Basel, Switzerland)
|May 27, 2026
Summary
A new AI system using RT-DETR accurately detects fungal hyphae in potassium hydroxide (KOH) microscopy images, improving diagnosis of dermatophytosis by reducing errors from artifacts and variability.
Area of Science:
- Medical Mycology
- Artificial Intelligence in Medicine
- Image Analysis
Background:
- Potassium hydroxide (KOH) microscopy is standard for dermatophytosis diagnosis but faces challenges with artifacts and inter-observer variability.
- Accurate identification of fungal hyphae is crucial for timely and effective treatment.
Purpose of the Study:
- To develop and evaluate a transformer-based object detection framework (RT-DETR) for precise fungal structure localization in KOH microscopy images.
- To benchmark the RT-DETR model against convolutional neural network (CNN) based detectors.
Main Methods:
- A dataset of 2540 KOH microscopy images was manually annotated to distinguish fungal elements from artifacts.
- The RT-DETR model was trained and validated using five-fold stratified cross-validation.
- Performance was compared against YOLOv11 and Faster R-CNN under identical conditions.
Main Results:
- RT-DETR achieved a mean Average Precision (AP@0.50) of 89.73% ± 1.48%, with high precision (0.921 ± 0.014) and recall (0.831 ± 0.011).
- The model demonstrated high image-level sensitivity (0.989 ± 0.022) with minimal missed cases.
- RT-DETR outperformed CNN-based detectors in accuracy and artifact suppression.
Conclusions:
- A transformer-based AI system shows technical feasibility for detecting fungal regions in KOH microscopy.
- This AI system can serve as a valuable decision-support tool for clinicians.
- Further multi-center validation is needed to confirm clinical generalizability.

