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Updated: May 28, 2026

Exploring the Root Microbiome: Extracting Bacterial Community Data from the Soil, Rhizosphere, and Root Endosphere
Published on: May 2, 2018
Dynamics and Diversity of Microbial Community Succession During the Solid-State Fermentation Process of Fuzhuan Brick
Yulu Wang1, Jialu Ao1, Qiankun Guo1
1College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095, China.
Abstract:
Sea buckthorn (Hippophae rhamnoides L.) leaves are rich in nutrients and bioactive constituents, with great potential for fermented tea development. It has been demonstrated that Fuzhuan brick tea processing can improve sea buckthorn leaf tea flavor, but the underlying microbial succession remains unexplored. Therefore, we characterized the dynamic succession and interrelationships of bacterial and fungal communities via Illumina NovaSeq 6000 sequencing. β-diversity analysis revealed successive shifts in microbial community structure, with fungal communities changing mainly in the early stage and bacterial communities varying more in the late stage of fermentation. The relative abundance of Pseudomonas, a genus frequently associated with flavor formation and tea quality, increased steadily. Fungal taxonomic analysis revealed that the genus Aspergillus, particularly the species Aspergillus chevalieri, remained dominant throughout the fermentation process. Linear discriminant analysis effect size indicated an enrichment of microbial taxa typical of fermentation, accompanied by a relative reduction in putative opportunistic microbes. Additionally, Aspergillus exhibited significant negative correlations with five key differentially abundant bacterial genera. Interestingly, microbial co-occurrence networks suggested an overall tendency toward coexistence rather than mutual exclusion between the bacterial and fungal communities. This work provides a theoretical foundation for the development of novel fermented sea buckthorn leaf tea products.
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