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Phenotypic and Genetic Characteristics of blaIMP-6-Harboring Enterobacterales Isolates Lacking blaCTX-M-2 in Japan
Koichi Yamaguchi1, Ryuichi Nakano1, Akiyo Nakano1
1Department of Microbiology and Infectious Diseases, Nara Medical University, 840 Shijo-cho, Kashihara-shi 6348521, Nara, Japan.
Abstract:
Carbapenemase-producing Enterobacterales (CPE) is a global threat. IMP-6, a prevalent carbapenemase in western Japan, is mostly disseminated via CTX-M-2 extended-spectrum β-lactamase (ESBL) co-producing Enterobacterales. However, the existence and characteristics of Enterobacterales harboring blaIMP-6 without blaCTX-M-2 remain unclear. We analyzed the phenotypic and genetic characteristics of clinical blaIMP-6-harboring Enterobacterales isolates, focusing on those lacking blaCTX-M-2. Overall, 220 blaIMP-6-harboring isolates collected from 76 Japanese hospitals between 2014 and 2021 were characterized by antimicrobial susceptibility, presence of CTX-M-type ESBLs, plasmid incompatibility, plasmid transfer experiments, and genome sequencing and analysis. Among these, 203 co-harbored blaCTX-M-2 group, with 90% of them demonstrating high conjugation frequency and broad-spectrum resistance to β-lactams. Of the remaining 17 isolates, nine lacked blaCTX-M, while eight co-harbored blaCTX-M-1 group (n = 2) or blaCTX-M-9 group (n = 6). Eleven isolates carried nontransferable plasmids with genetic structures distinct from those of blaIMP-6 and blaCTX-M-2 co-encoding plasmids, including eight non-incompatibility N plasmids. Fifteen isolates carried only blaIMP-6-encoding plasmids; two carried plasmids with blaIMP-6 and blaCTX-M (blaCTX-M-27 or blaCTX-M-65). This novel study revealed that blaIMP-6 can exist without blaCTX-M-2 on diverse, often nontransferable plasmids, suggesting distinct, lower dissemination pathways compared to those of epidemic blaCTX-M-2 co-carrying plasmids and highlighting previously overlooked plasmids that necessitate close monitoring.
Insights
Carbapenemase-producing Enterobacterales (CPE) carrying IMP-6 carbapenemase can exist without CTX-M-2 ESBL. These strains often harbor IMP-6 on diverse, non-transferable plasmids, suggesting different spread mechanisms.
Area of Science:
- Microbiology
- Molecular Biology
- Genetics
Background:
- Carbapenemase-producing Enterobacterales (CPE) represent a significant global health threat.
- IMP-6 carbapenemase is prevalent in western Japan, often co-occurring with CTX-M-2 extended-spectrum beta-lactamase (ESBL).
- The prevalence and characteristics of Enterobacterales harboring blaIMP-6 without blaCTX-M-2 are not well understood.
Purpose of the Study:
- To investigate the phenotypic and genetic features of clinical Enterobacterales isolates carrying blaIMP-6.
- To specifically focus on isolates lacking the blaCTX-M-2 gene.
- To understand the plasmid context and transferability of blaIMP-6 in the absence of blaCTX-M-2.
Main Methods:
- Antimicrobial susceptibility testing of 220 blaIMP-6-harboring Enterobacterales isolates from 76 Japanese hospitals (2014-2021).
- Detection of CTX-M-type ESBLs, plasmid incompatibility analysis, and plasmid transfer experiments.
- Genome sequencing and analysis to characterize genetic elements and plasmid structures.
Main Results:
- Most isolates (203/220) co-harbored blaCTX-M-2, showing high transfer frequency and broad-spectrum resistance.
- Seventeen isolates lacked blaCTX-M-2; nine lacked all blaCTX-M genes, while eight harbored other blaCTX-M groups.
- Eleven isolates possessed nontransferable plasmids distinct from blaIMP-6/blaCTX-M-2 co-encoding plasmids; 15 carried only blaIMP-6 plasmids.
Conclusions:
- blaIMP-6 can be present in Enterobacterales without blaCTX-M-2, often on diverse and nontransferable plasmids.
- These distinct plasmid types suggest alternative, potentially slower dissemination pathways compared to epidemic strains.
- Previously overlooked plasmids carrying blaIMP-6 warrant close monitoring due to their potential role in resistance spread.
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