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Abundance of Inflammatory Response Genes Among Cardiovascular Disease and Ischemic Stroke Genes
Gennady V Khvorykh1, Ivan B Filippenkov1, Andrey V Khrunin1
1Laboratory of Human Molecular Genetics, National Research Centre "Kurchatov Institute", Kurchatov Sq. 1, Moscow 123182, Russia.
Insights
This study identified 1285 inflammatory genes involved in cardiovascular disease and ischemic stroke, highlighting NFKB1 and RELA. These findings are crucial for developing new anti-inflammatory therapies for stroke.
Area of Science:
- Molecular Biology
- Genetics
- Immunology
Background:
- Inflammation is central to cardiovascular disease and ischemic stroke pathogenesis.
- The precise number and identity of inflammatory genes involved remain incompletely understood.
- Identifying these genes is critical for therapeutic development.
Purpose of the Study:
- To identify and analyze inflammatory genes associated with cardiovascular disease and ischemic stroke.
- To compile a comprehensive list of inflammation-related genes relevant to these conditions.
- To discover potential therapeutic targets for anti-inflammatory strategies.
Main Methods:
- Retrieved human gene data for ischemic stroke (N=1177) and cardiovascular disease (N=1756) from DisGeNET.
- Compiled inflammatory and immune response gene lists from Gene Ontology, NCBI, and Reactome databases.
- Integrated previously identified rat brain inflammatory genes (N=140) and performed bioinformatics analysis.
Main Results:
- A combined list of 1285 inflammatory genes relevant to cardiovascular disease and ischemic stroke was generated.
- NFKB1 and RELA genes showed the highest frequency across multiple inflammatory gene databases.
- A representative list of key inflammatory genes for ischemic stroke pathogenesis was established.
Conclusions:
- The study successfully compiled a significant list of inflammatory genes implicated in cardiovascular disease and ischemic stroke.
- NFKB1 and RELA are identified as highly frequent and potentially critical inflammatory genes.
- The identified genes offer promising targets for developing novel anti-inflammatory therapeutic strategies for ischemic stroke.
Abstract:
Inflammation plays a key role in the pathogenesis of many diseases, including cardiovascular disease and ischemic stroke. However, despite the existence of known inflammatory genes, the question of estimating their total number and the possibility of discovering new ones remains open. This study sought and analyzed genes involved in inflammation among genes related to cardiovascular disease and ischemic stroke. Human genes associated with ischemic stroke (N = 1177) and cardiovascular disease (N = 1756) were retrieved from the DisGeNET platform. Inflammatory and immune response genes were obtained from the Gene Ontology, NCBI, and Reactome databases. An additional list of 140 inflammatory genes was compiled based on our previously obtained data on the differential gene expression in a rat brain under transient middle cerebral artery occlusion. Genes that occurred simultaneously in both the inflammatory gene lists and gene lists of diseases were selected and considered. The resulting combined gene list included 1285 inflammatory genes. The NFKB1 and RELA genes demonstrated the highest frequencies across the various inflammatory gene selection resources we examined. Using a combination of experimental and bioinformatics approaches, a representative list of inflammatory genes important for the pathogenesis of ischemic stroke was compiled. The identified genes may be crucial for the development of anti-inflammatory therapeutic strategies for this disease.
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