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Updated: May 28, 2026

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Oligopeptide Competition Assay for Phosphorylation Site Determination
Published on: May 18, 2017
Cationic imidazolium macrocycles enable array-based, site-selective optical detection of peptide phosphorylation.
Arman C Garcia1, Ria Lian1, Parisa Fasihianifard1
1Department of Chemistry, University of California-Riverside, Riverside, CA 92521, USA. richard.hooley@ucr.edu.
Organic & Biomolecular Chemistry
|May 27, 2026
Summary
New macrocyclic hosts detect peptide phosphorylation using π-stacking interactions. This method enables selective optical detection of modified serine residues, differentiating phosphorylation sites on peptides.
Area of Science:
- Chemical Biology
- Supramolecular Chemistry
Background:
- Peptide phosphorylation is crucial in cell signaling.
- Selective detection of phosphorylated sites remains challenging.
Purpose of the Study:
- To develop a novel method for site- and state-selective optical detection of peptide phosphorylation.
- To utilize polycationic imidazolium macrocycles and styrylpyridinium dyes for this purpose.
Main Methods:
- Synthesis of simple polycationic imidazolium macrocycles from commercial precursors.
- Pairing macrocycles with styrylpyridinium dyes in an arrayed format.
- Investigating interactions via complex equilibrium analysis.
Main Results:
- Polycationic macrocycles exhibit strong affinity for anionic and hydrophobic peptide strands.
- Detection relies on π-stacking interactions with the peptide backbone and sidechains, not direct phosphate binding.
- Complex equilibria involving peptide:host, peptide:dye, and dye:host assemblies, including ternary complexes, enable differentiation.
- Successful differentiation of phosphorylation at different sites on identical peptide strands.
Conclusions:
- The developed system enables site- and state-selective optical detection of serine phosphorylation.
- The method leverages supramolecular interactions for sensitive peptide analysis.
- This approach offers a new tool for studying phosphorylation-dependent biological processes.

