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Updated: May 29, 2026

Lipidomics and Transcriptomics in Neurological Diseases
Published on: March 18, 2022
Molecular spatial profiling of chronic intervillositis of unknown etiology implies aberrant lipid metabolism
Senthilkumar Kailasam1, Bahi Fayek2, Mohamed A Bedaiwy2
1Canadian Centre for Computational Genomics, Human Genetics, McGill University, Montreal, Quebec, Canada.
Introduction:
Chronic intervillositis of unknown etiology (CIUE) is a placental inflammatory condition characterized by accumulation of maternal macrophages in the intervillous space, associated with recurrent pregnancy loss and fetal growth restriction. The pathogenesis remains poorly understood.
Methods:
We performed CosMx spatial molecular imaging (6000-target RNA panel) on formalin-fixed, paraffin-embedded tissue from 14 CIUE cases (7 high-grade, 7 low-grade; mean gestational age 9 weeks), 3 SARS-CoV-2 placentitis cases, 5 normal placentas, and 1 kidney allograft rejection sample, profiling 37,203 cells across 20 cell types.
Results:
Spatial neighborhood analysis using k-nearest neighbor (k = 30) colocalization revealed progressive architectural disruption from low-grade to high-grade CIUE, characterized by loss of fibroblast-syncytiotrophoblast compartmentalization and increased macrophage clustering. Differential gene expression analysis of intervillus macrophages in CIUE compared to SARS-CoV-2 placentitis identified upregulation of genes involved in sarcoidosis and cholesterol and oxidized lipid metabolism (CYP27A1, NR1H3, CHI3L1, ALDH2, ALDH1A1). Hofbauer cells in CIUE showed a similar lipid-associated phenotype. Gene set enrichment analysis confirmed upregulation of G protein-coupled receptor signaling and FGFR pathways in CIUE macrophages, with downregulation of interferon signaling relative to SARS-CoV-2 placentitis.
Discussion:
These findings suggest that CIUE maternal macrophages exhibit a gene expression profile reminiscent of sarcoidosis macrophages and associated with lipid metabolism rather than viral response or classical allograft rejection, raising the hypothesis that oxidized lipid or cholesterol-related pathways may be involved in CIUE pathobiology.
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