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Updated: May 29, 2026

Evidence-based Knowledge Synthesis and Hypothesis Validation: Navigating Biomedical Knowledge Bases via Explainable AI and Agentic Systems
Published on: June 13, 2025
KBDR: document retrieval based on graph matching with knowledge enhancement
Jingxuan Liu1, Yihan Huang1, Jialuoyi Tan2
1School of AI and Advanced Computing, Xi'an Jiaotong-Liverpool University, Suzhou, 215123, China.
Knowledge Based Document Retrieval (KBDR) improves search accuracy by using knowledge graphs to understand document meaning. This approach enhances retrieval efficiency and robustness, overcoming limitations of traditional methods.
Area of Science:
- Information Science
- Computer Science
- Artificial Intelligence
Background:
- Traditional document retrieval struggles with vocabulary synonymy, leading to inaccuracies.
- Existing matching algorithms often fail to capture semantic relevance beyond exact keyword matches.
Purpose of the Study:
- To introduce Knowledge Based Document Retrieval (KBDR) for enhanced semantic understanding.
- To address limitations in current document retrieval systems by incorporating external knowledge.
Main Methods:
- Constructing document graphs using named entity recognition and relation extraction.
- Expanding entities with external knowledge bases (HowNet, ConceptNet) for richer semantic connections.
- Applying a Graph Attention Network (GAT) to model inter-entity dependencies for relevance ranking.
Main Results:
- KBDR demonstrated superior performance compared to baseline methods across five datasets (CIPP, CNSE, CNSS, AAN, OC).
- Achieved the highest Recall@1 of 25.88% on the CNSE dataset, indicating significant retrieval improvement.
- The proposed method enhances efficiency and robustness in document retrieval tasks.
Conclusions:
- KBDR effectively overcomes conceptual deviations in document retrieval.
- The graph-based knowledge expansion approach advances the development of more sophisticated retrieval systems.
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