Controlling Tricyclic Peptide Architecture in mRNA Display through Orthogonal Reactivity on Rotationally Flexible
Minglong Liu1,2, Vito Thijssen3, Sanne J M Verhoork3
1Department of Chemistry and Pharmaceutical Sciences, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, 1081 HV Amsterdam, The Netherlands.
We developed a new method to create complex, three-ring peptide drugs using mRNA display. This approach accelerates the discovery of potent and stable peptide therapeutics with potential for drug development.
Area of Science:
- Medicinal Chemistry
- Biotechnology
- Drug Discovery
Background:
- Macrocyclization enhances peptide drug candidate conformational control and function.
- Genetically encoded display platforms facilitate discovery of conformationally restricted peptides.
Purpose of the Study:
- To integrate tetrafunctional scaffolds into mRNA display for direct discovery of tricyclic peptides.
- To overcome topological challenges in macrocyclization using scaffold rotational flexibility.
Main Methods:
- Utilized mRNA display with tetrafunctional scaffolds.
- Employed orthogonal reactions with cysteine and azidohomoalanine residues.
- Generated single, well-defined tricyclic peptide architectures.
Main Results:
- Discovered tricyclic peptides targeting an antibody and the Fzd5 receptor.
- Achieved low nanomolar affinity for top peptide candidates.
- Demonstrated minimal peptide degradation in serum after 24 hours.
- Confirmed target engagement in cell culture.
Conclusions:
- This method enables direct generation of advanced multicyclic peptide drug candidates.
- The approach streamlines peptide drug discovery by yielding conformationally constrained and stable molecules.
- Potential to accelerate the development of novel peptide therapeutics.
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