Intercalation Favors DNA Covalent Photobinding in Photoresponsive Dual PDT/PCT Bimetallic Assemblies

Abdelazim M A Abdelgawwad1, Daniel Roca-Sanjuán1, Marta E Alberto2

  • 1Institut de Ciència Molecular, Universitat de València, P.O. Box 22085, València 46071, Spain.

Insights

This study explores light-activated cancer therapies, combining photosensitizers with DNA-targeting drugs. Molecular dynamics simulations reveal light accelerates drug-DNA interactions, enhancing phototoxicity for improved cancer treatment strategies.

Area of Science:

  • Photodynamic therapy
  • Chemical biology
  • Computational chemistry

Background:

  • Oxygen-independent cancer therapies are needed due to low oxygen levels in tumors.
  • Combining photosensitizers with DNA-targeting drugs offers a dual mechanism for cancer treatment.
  • The molecular mechanisms underlying phototoxicity in these systems require further elucidation.

Purpose of the Study:

  • To investigate the molecular basis of phototoxicity in bimetallic Ru(II)/Os(II) and Pt(II) assemblies targeting DNA.
  • To understand the dynamic factors, timescales, and environmental effects influencing DNA photoreactivity.
  • To explore the role of DNA interaction modes, such as intercalation, in enhancing phototoxicity.

Main Methods:

  • Microsecond molecular dynamics simulations.
  • Multiscale biased quantum mechanics/molecular mechanics (QM/MM) MD simulations.
  • Analysis of DNA interaction modes and free energy landscapes.

Main Results:

  • Photosensitizer exhibits persistent major/minor groove interactions with DNA.
  • Thermodynamically favored DNA intercalation was observed.
  • Light significantly accelerates ligand exchange reactions between guanine and the platinum center in the excited state (energy barriers ~6 kcal·mol⁻¹).

Conclusions:

  • DNA intercalation can enhance phototoxicity by limiting DNA conformational flexibility and improving light absorption.
  • The study provides molecular insights into the accelerated drug-DNA interactions under light activation.
  • This work supports the development of oxygen-independent photodynamic therapies for solid tumors.

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