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Updated: Jun 2, 2026

Single-molecule Manipulation of G-quadruplexes by Magnetic Tweezers
Published on: September 19, 2017
Natural G-Quadruplex Stabilizers: A Targeted Strategy for Breast Cancer Therapy
Chengjian Cao1, Chaoxiang Lv2, Ali ElFar2
1Zigong Academy of Medical Sciences, Zigong First People's Hospital, Zigong, Sichuan, People's Republic of China.
Abstract:
G-quadruplexes (G4s) are non-canonical DNA structures that are important in gene regulation, telomere repair, and cancer. The G4s in breast cancer (BC) are enriched in the promoters of important oncogenes, such as c-MYC, KRAS, BCL2, HER2, and ESR1, which are good therapeutic targets. Although synthetic G4 stabilizers are well-researched, natural products are a poorly investigated source of selective ligands with good biocompatibility and multi-target properties. This review systematically collects and analyzes natural compounds, such as flavonoids, alkaloids, polyphenols, terpenoids, and organosulfur compounds, which exhibit G4-stabilizing effects, particularly their suitability in BC. We provide a comprehensive landscape approach to define interactions between G4-ligands, discuss how these interactions are stabilized (via π-π stacking, electrostatic interactions, and groove binding), and map these compounds to genomic regions associated with BC G4-formation. We also identify key research gaps that are essential, including limited in vivo validation, subtype-specific efficacy, and pharmacokinetic issues. The available evidence suggests that natural G4 stabilizers have potential as multi-target and biocompatible agents for BC therapy. However, their effectiveness is currently constrained by a shortage of thorough in vivo studies and subtype-specific data. Lastly, to incorporate in silico docking, mechanistic studies, and translational strategies, we present a prospective roadmap for drug discovery to bring natural G4 stabilizers targeting BC.
Insights
Natural compounds can stabilize G-quadruplexes (G4s), crucial in cancer gene regulation. This review explores natural G4 stabilizers for breast cancer (BC) therapy, highlighting their potential and research gaps.
Area of Science:
- Genomics and Molecular Biology
- Pharmacology and Drug Discovery
- Oncology
Background:
- G-quadruplexes (G4s) are non-canonical DNA structures vital for gene regulation, telomere maintenance, and implicated in cancer development.
- Breast cancer (BC) exhibits G4 enrichment in oncogene promoters (e.g., c-MYC, HER2), presenting therapeutic targets.
- While synthetic G4 stabilizers are studied, natural products offer a less explored avenue for selective, biocompatible, and multi-target ligands.
Purpose of the Study:
- To systematically review and analyze natural compounds with G4-stabilizing effects, focusing on their potential application in breast cancer (BC).
- To define the interactions between G4 ligands and map these compounds to BC-associated genomic regions.
- To identify research gaps and propose a roadmap for natural G4 stabilizer drug discovery for BC.
Main Methods:
- Systematic literature review and analysis of natural compounds (flavonoids, alkaloids, polyphenols, terpenoids, organosulfur compounds) exhibiting G4-stabilizing properties.
- Landscape approach to define G4-ligand interactions, including stabilization mechanisms (π-π stacking, electrostatic interactions, groove binding).
- Mapping of identified compounds to genomic regions associated with G4 formation in breast cancer.
Main Results:
- Identified various natural compound classes with G4-stabilizing effects, showing potential for BC therapy.
- Detailed interactions between G4 ligands and stabilization mechanisms were analyzed.
- Key research gaps identified: limited in vivo validation, lack of subtype-specific efficacy data, and pharmacokinetic challenges.
Conclusions:
- Natural G4 stabilizers demonstrate promise as multi-target, biocompatible agents for breast cancer (BC) therapy.
- Current effectiveness is limited by insufficient in vivo studies and subtype-specific data.
- A prospective roadmap involving in silico docking, mechanistic studies, and translational strategies is proposed for future drug discovery.
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