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Methods to Discover Alternative Promoter Usage and Transcriptional Regulation of Murine Bcrp1
Published on: May 27, 2016
Canonical and variant PRC1 functionally converge on PRC2 targets to regulate transcriptional programs during mouse
Claudia Gentile1,2, Rachel Paul1, Fanny Guerard-Millet1,3
1Genetics and Development Research Unit, Institut de Recherches Cliniques de Montréal, Montréal, Québec H2W 1R7, Canada.
Polycomb Repressive Complexes (PRC1 and PRC2) maintain gene silencing during mouse limb development. Their combined action ensures proper gene expression transitions for limb formation.
Area of Science:
- Developmental Biology
- Epigenetics
- Molecular Biology
Background:
- Limb development involves precise gene regulation for cell differentiation.
- Transcriptional silencing of early genes is crucial but poorly understood.
- Polycomb Repressive Complexes (PRC1 and PRC2) are key epigenetic regulators.
Purpose of the Study:
- Investigate the role of PRC1 and PRC2 in transcriptional silencing during mouse forelimb development.
- Elucidate mechanisms of gene silencing transitions from early to differentiated cell fates.
Main Methods:
- Conditional inactivation of Eed and Ring1b in mouse forelimbs.
- Chromatin immunoprecipitation to assess SUZ12 and RING1B occupancy.
- Analysis of gene expression patterns and limb morphology.
Main Results:
- SUZ12 occupancy shifts during forelimb development.
- Eed inactivation leads to early gene derepression, even with H2AK119Ub.
- Canonical and variant PRC1 complexes are concurrently recruited to target genes.
- Combined EED and RING1B inactivation causes severe limb defects and gene derepression.
Conclusions:
- Functional convergence of canonical and variant PRC1 is essential for robust transcriptional silencing.
- PRC1 and PRC2 regulate gene expression transitions critical for limb morphogenesis.
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