Jove
Visualize
Contact Us
JoVE
x logofacebook logolinkedin logoyoutube logo
ABOUT JoVE
OverviewLeadershipBlogJoVE Help Center
AUTHORS
Publishing ProcessEditorial BoardScope & PoliciesPeer ReviewFAQSubmit
LIBRARIANS
TestimonialsSubscriptionsAccessResourcesLibrary Advisory BoardFAQ
RESEARCH
JoVE JournalMethods CollectionsJoVE Encyclopedia of ExperimentsArchive
EDUCATION
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab ManualFaculty Resource CenterFaculty Site
Terms & Conditions of Use
Privacy Policy
Policies

Related Concept Videos

Improving Translational Accuracy02:07

Improving Translational Accuracy

Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
Improving Translational Accuracy02:07

Improving Translational Accuracy

Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...

You might also read

Related Articles

Articles linked to this work by shared authors, journal, and citation graph.

Sort by
Same journal

AI-Assisted Detection of Supraspinatus Tendon Pathologies Using a Hierarchical Deep Learning Model to Improve Clinical Applicability: Development and Evaluation Study.

JMIR medical informatics·2026
Same journal

"Do It by Myself" or Autonomy, Participation, and Assistive Devices and Technology Needs of Children and Youth With Disabilities: Text Mining Analysis of a National Survey in France.

JMIR medical informatics·2026
Same journal

The Orphanet Nomenclature and Classification of Rare Diseases for Improved Patient Recognition and Data Interoperability: Qualitative and Quantitative Analysis.

JMIR medical informatics·2026
Same journal

Feasibility of Tailoring Artificial Intelligence-Assisted Ambient Scribes for Intensive Care Unit Rounds: Algorithm Development and Validation.

JMIR medical informatics·2026
Same journal

Determinants of Acute Kidney Injury After Endoscopic Retrograde Cholangiopancreatography in Patients With Liver Cirrhosis: Retrospective Observational Study.

JMIR medical informatics·2026
Same journal

Multimodule Human-Artificial Intelligence Collaboration Pipeline for Large Language Model-Assisted Thematic Analysis Across Digital Health Interview Studies: Comparative Evaluation Study.

JMIR medical informatics·2026

Related Experiment Video

Updated: Jun 5, 2026

Augmenting Large Language Models via Vector Embeddings to Improve Domain-Specific Responsiveness
03:14

Augmenting Large Language Models via Vector Embeddings to Improve Domain-Specific Responsiveness

Published on: December 6, 2024

Clinical Note Generation From Doctor-Patient Conversations Using Parameter-Efficient Fine-Tuning Large Language

Saib Ahmed1, Farig Yousuf Sadeque1

  • 1Department of Computer Science & Engineering, BRAC University, Kha 224 Pragati Sarani, Merul Badda, Dhaka, 1212, Bangladesh, 880 1796965173.

JMIR Medical Informatics
|June 3, 2026
PubMed
Summary
This summary is machine-generated.

Parameter-efficient fine-tuning of large language models (LLMs) shows promise for generating accurate clinical notes from doctor-patient conversations. These advanced LLMs streamline documentation, allowing clinicians more time for patient care.

Keywords:
BERTScoreDialogue2NoteLlamaMeditronMistralROUGE scoreRecall-Oriented Understudy for Gisting EvaluationRecall-Oriented Understudy for Gisting Evaluation scorebidirectional encoder representations from transformersbidirectional encoder representations from transformers scoreclinical NLPclinical natural language processingdecoder-onlynatural language processingsummarizationtransformer

Related Experiment Videos

Last Updated: Jun 5, 2026

Augmenting Large Language Models via Vector Embeddings to Improve Domain-Specific Responsiveness
03:14

Augmenting Large Language Models via Vector Embeddings to Improve Domain-Specific Responsiveness

Published on: December 6, 2024

Area of Science:

  • Artificial Intelligence in Healthcare
  • Natural Language Processing for Clinical Documentation
  • Machine Learning in Medical Summarization

Background:

  • Clinical note documentation is time-intensive, impacting healthcare efficiency.
  • Limited open-source datasets hinder accurate clinical summarization using natural language processing.
  • Large language models (LLMs) offer a promising solution for generating clinical notes.

Purpose of the Study:

  • Evaluate parameter-efficient fine-tuned decoder-only LLMs for clinical note generation.
  • Assess medical accuracy, robustness, and feasibility of PEFT under resource constraints.
  • Compare LLM performance against traditional models for clinical summarization.

Main Methods:

  • Fine-tuned decoder-only LLMs (Mistral, Meditron, Llama) using parameter-efficient fine-tuning (PEFT) on the Medical Training Summarization Dialog dataset.
  • Evaluated models using ROUGE and BERTScore for automatic assessment.
  • Expert physician review assessed clinical accuracy, completeness, concision, relevance, and readability.

Main Results:

  • Meditron-7B and Llama3-8B achieved state-of-the-art results among open-source PEFT models.
  • Decoder-only LLMs, especially Llama variants, outperformed traditional models.
  • Human evaluation confirmed clinical coherence and accuracy of Llama3-8B and Mistral-7B.

Conclusions:

  • PEFT of decoder-only LLMs can transform clinical workflows by streamlining documentation.
  • These models provide a scalable and resource-efficient alternative for medical documentation.
  • Optimizing LLMs through techniques like higher quantization can enhance efficiency without compromising performance.