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Published on: March 27, 2020
YARS2 mediates PARPi resistance in pancreatic cancer by regulating the MYC-E2F axis
Yu Hu1, Peng Yuan1, Xiangyi Bu1
1Cheeloo College of Medicine, Shandong University, Jinan, Shandong, China; Department of General Surgery, The First Affiliated Hospital of USTC, Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei, Anhui, China.
Background:
Pancreatic ductal adenocarcinoma (PDAC) resistance to PARP inhibitors (PARPi) remains poorly understood, the mechanism of resistance remain poorly understood.
Material And Methods:
We integrated multi-omics data from The Cancer Genome Atlas-Pancreatic Adenocarcinoma (TCGA-PAAD) datasets, Cancer Cell Line Encyclopedia (CCLE), and the Genomics of Drug Sensitivity in Cancer (GDSC) performed weighted gene co-expression network analysis (WGCNA) to identify hub genes linked to PARPi resistance. GSE86394 from the Gene Expression Omnibus (GEO) database was utilized to differential expressed genes (DEGs) and performed functional enrichment analyses. CCK8, flow cytometry, Transwell assay were conducted to detected cell viability, apoptosis, and migration. Xenograft models was conducted to investigate the effect of YARS2 on PARPi-resistant in vivo. Immunohistochemistry (IHC) was used to detect the expression of various proteins. Terminal deoxynucleotidyl transferase dUTP nick-end labeling (TUNEL) was utilized to assess cells apoptosis. Gene and protein expression were detected by quantitative reverse transcription PCR (qRT-PCR) and western blotting (WB), respectively.
Results:
YARS2 was identified as a PARPi resistance hub gene, whose high expression correlated with poor prognosis in PDAC. YARS2 was significantly upregulated in PARPi-resistant PDAC cells, and its knockdown reversed PARPi resistance in vitro and in vivo. Mechanistically, YARS2 knockdown suppressed the expression of the c-MYC, E2F1 and elevated levels of phosphorylated histone H2AX (γ-H2AX). However, the overexpression of c-MYC was reversed the inhibitory role of YARS2 knockdown in PARPi-resistant PDAC cells.
Conclusion:
Our findings reveal that YARS2 mediates PARPi resistance via the MYC/E2F1 pathway in PDAC, highlighting YARS2 may serve as a potential target for therapy to counteract PARPi resistance.
Insights
Yeast RNA Splicing 2 (YARS2) drives resistance to PARP inhibitors (PARPi) in pancreatic cancer by activating the MYC/E2F1 pathway. Targeting YARS2 may overcome PARPi resistance in pancreatic ductal adenocarcinoma (PDAC).
Area of Science:
- Oncology
- Molecular Biology
- Genomics
Background:
- Pancreatic ductal adenocarcinoma (PDAC) exhibits resistance to PARP inhibitors (PARPi).
- The underlying mechanisms of PARPi resistance in PDAC are not fully understood.
Purpose of the Study:
- To identify key genes associated with PARPi resistance in PDAC.
- To elucidate the molecular mechanisms by which YARS2 influences PARPi resistance.
Main Methods:
- Integrated multi-omics data analysis (TCGA-PAAD, CCLE, GDSC) and Weighted Gene Co-expression Network Analysis (WGCNA).
- Differential gene expression analysis, functional enrichment, and in vitro/in vivo experiments including cell assays and xenograft models.
- Quantitative reverse transcription PCR (qRT-PCR) and western blotting (WB) for gene and protein expression analysis.
Main Results:
- Yeast RNA Splicing 2 (YARS2) was identified as a crucial hub gene promoting PARPi resistance in PDAC.
- High YARS2 expression correlated with poor prognosis; its knockdown sensitized PDAC cells to PARPi in vitro and in vivo.
- YARS2 knockdown suppressed MYC/E2F1 expression and increased γ-H2AX levels, with MYC overexpression reversing YARS2 knockdown's effect.
Conclusions:
- YARS2 mediates PARPi resistance in PDAC through the MYC/E2F1 pathway.
- YARS2 represents a potential therapeutic target for overcoming PARPi resistance in pancreatic cancer.
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